AT4G36210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.489 vacuole 0.290 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF726) | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF726); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 675 Blast hits to 638 proteins in 219 species: Archae - 12; Bacteria - 101; Metazoa - 133; Fungi - 230; Plants - 68; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:17130951..17134302 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59769.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.57 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||
| Length | 550 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVEQEMALAK AADAMVHSIQ CSVSIDAKKE KHQEYENECR EKYAVPEVKS KDVDLDKEKD KKEAAESAAR EGLEAGVVII DGSHKPEVLE NEKSVEEVTL 101: LSHQRKINVL YELLSACLSD KHHEDKKCKR CRKGYDARHR VALRLLATWF NIEWIKVEAI ETMVACSAMA IQKSAEMKGE DNLTPTTSWA KWKRGGIIGA 201: AAITGGTLMA ITGGLAAPAI AAGFGALAPT LGTIIPVIGA GGFAAAASAA GTVAGSVAVA ASFGAAGAGL TGTKMARRIG DLDEFEFKAI GENHNQGRLA 301: VEVLVAGVVF EEEDFVKPWE GLTSNLERYT LQWESKNLIL VSTAIQDWLT SRLAMELMKQ GAMHTVLASL LMALAWPATI LVAADFIDSK WSIAIDRSDK 401: AGRLLAEVLQ KGLQGNRPIT LVGFSLGARV IFKCLQALAE TEQNAELVER VVLLGAPISI NSENWRDVRK MVAGRFINVY ATNDWTLGIA FRASLISQGL 501: AGIQPICIPG IENVDVTDMV EGHSSYLWKT QQILERLEID TYYPVFRDTL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)