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AT3G24180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
ASURE: endoplasmic reticulum
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Beta-glucosidase, GBA2 type family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Beta-glucosidase, GBA2 type family protein; FUNCTIONS IN: glucosylceramidase activity, catalytic activity; INVOLVED IN: glucosylceramide catabolic process, sphingolipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glucosylceramidase (InterPro:IPR006775), Six-hairpin glycosidase-like (InterPro:IPR008928), Beta-glucosidase, GBA2 type (InterPro:IPR014551); BEST Arabidopsis thaliana protein match is: Beta-glucosidase, GBA2 type family protein (TAIR:AT5G49900.1); Has 952 Blast hits to 742 proteins in 175 species: Archae - 79; Bacteria - 320; Metazoa - 186; Fungi - 2; Plants - 267; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G24180-MONOMERBioCyc:ARA:GQT-1867-MONOMERCAZy:GH116EC:3.2.1.45
eggNOG:COG4354eggNOG:KOG2119EMBL:AK226971EMBL:AY065402
EMBL:CP002686EnsemblPlants:AT3G24180EnsemblPlants:AT3G24180.1EnsemblPlants:AT3G24180.2
entrez:822004Gene3D:1.50.10.10GeneID:822004GO:GO:0004348
GO:GO:0005886GO:GO:0006680GO:GO:0016021Gramene:AT3G24180.1
Gramene:AT3G24180.2hmmpanther:PTHR12654HOGENOM:HOG000234168InterPro:IPR006775
InterPro:IPR008928InterPro:IPR012341InterPro:IPR014551InterPro:IPR024462
KEGG:00511+3.2.1.45KEGG:00600+3.2.1.45KEGG:ath:AT3G24180KO:K17108
OMA:RENFDAGPfam:PF04685Pfam:PF12215PhylomeDB:Q8VZ08
PIRSF:PIRSF028944Proteomes:UP000006548Reactome:R-ATH-1660662RefSeq:NP_001030757.1
RefSeq:NP_189060.2STRING:3702.AT3G24180.1SUPFAM:SSF48208TAIR:AT3G24180
UniGene:At.22856UniProt:Q8VZ08
Coordinates (TAIR10) chr3:-:8735011..8741147
Molecular Weight (calculated) 105992.00 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.40
Length 950 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGATLFHRR KHSWPTEEFI SRSTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS
101: QGVPLGGMGS GSISRGFRGE FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLSP GQHGSLGKSR DKGLSSWGWN LNGQHSTYHA LFPRAWTIYD
201: GEPDPELKIS CRQISPFIPN NYRDSSLPAA VFVYTLVNTG KERAKVSLLF TWANSMGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAIAAS
301: ETQNVNVTVL PCFGLSEDSS FTAKDMWDTM EQDGKFDQEN FNSGPSTPSL AGDTICAAVS ASAWVEAHGK CTVSFALSWS SPKVKFSKGS TYDRRYTKFY
401: GTSPRAALDL VHDALTNYKR WEEDIEAWQN PILRDERLPE WYKFTLFNEL YFLVAGGTVW IDSSSLNANG NSQHQQSGLG NSDGKVGGLD INDQRNDLGN
501: GNSVGVKSND EVSAIHNRNG LFVDTPHVDD GDDVGRFLYL EGVEYVMWCT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNVGIRK
601: VRGAVPHDLG MHDPWNEMNA YNIHDTSRWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC
701: GCLWLAALQA AAAMALQIGD KFFAELCKNK FLNAKAALET KLWNGSYFNY DSGSSSNSKS IQTDQLAGQW YAASSGLPPL FEESKIRSTM QKIFDFNVMK
801: TKGGKMGAVN GMHPDGKVDD TCMQSREIWT GVTYAAAATM ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL
901: SLPKAILDAP QINMMDRVHL SPRSRRFSNN FKVVKHKAKC FGNSALSCSC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)