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AT4G36140.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.761
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : disease resistance protein (TIR-NBS-LRR class), putative
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G45050.1); Has 19842 Blast hits to 11670 proteins in 467 species: Archae - 4; Bacteria - 629; Metazoa - 268; Fungi - 32; Plants - 18688; Viruses - 0; Other Eukaryotes - 221 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XRTNeggNOG:KOG0167EMBL:AL022141EMBL:AL161588
EMBL:CP002687EnsemblPlants:AT4G36140EnsemblPlants:AT4G36140.1entrez:829771
Gene3D:3.40.50.10140Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:829771
GO:GO:0005524GO:GO:0007165GO:GO:0016021GO:GO:0043531
Gramene:AT4G36140.1hmmpanther:PTHR24209hmmpanther:PTHR24209:SF15HOGENOM:HOG000115011
InterPro:IPR000157InterPro:IPR002182InterPro:IPR003593InterPro:IPR011713
InterPro:IPR011991InterPro:IPR027417InterPro:IPR032675KEGG:ath:AT4G36140
OMA:REECSESPfam:PF00931Pfam:PF01582Pfam:PF07725
Pfscan:PS50104PhylomeDB:O65506PIR:T04583PROSITE:PS50104
Proteomes:UP000006548RefSeq:NP_195337.1SMART:SM00255SMART:SM00382
SMR:O65506STRING:3702.AT4G36140.1SUPFAM:SSF46785SUPFAM:SSF52058
SUPFAM:SSF52200SUPFAM:SSF52540TAIR:AT4G36140TMHMM:TMhelix
UniGene:At.31348UniProt:O65506
Coordinates (TAIR10) chr4:-:17098956..17104479
Molecular Weight (calculated) 182797.00 Da
IEP (calculated) 6.65
GRAVY (calculated) -0.19
Length 1607 amino acids
Sequence (TAIR10)
(BLAST)
0001: MDYSSASLLR ICAAAITILG TVSFLIYEKF IRSNPQKKKK ITASSRNWEH NVFSSFSSVD VPKSFLSRIR KELRRKGFEP LIDNETERCV SIGPELRNAI
0101: SVSRIVIVVL SRNYALSPWC LDELVEIMKC KEELGQRVVT IFYNLDPIDV LKQTGDFGDN FRKTRKGKTD EDIWKCTRAL AELPRVYKLT SRLSIKIDDT
0201: AMNKHREECE RKNKEDIDRW IKALEQVATI DGYRSRDWDD EKAMVKKIAN DISSIMNNST QSSASQGLVG MEAHMEKMKE LLGLDSNKVR LIGICGLPGS
0301: GKTTIAKRLY QQLLPQFELS TIIIDIKGCY PRTCYNEDDR KLQLQSHLLS QLLNHKFTGE ILQLEAAHEM LKDKKVVLVL DDVDSIGQLD ALANEARWFG
0401: PGSRIIITTQ DQRLLEEQGI QYIYNVDFPP PNGLLPTVYI YCEDTLQYSF ASHLSMDFRR KGISAFVNYS ETLDVIERVS ASVLVFSKSC VSSTSCLDML
0501: VRVFQCRRKT GQLVVPVYYG ISSSDVVVQE HKSVDRIREW SSALQELREL PGHHNREECS ESELVEEIVK DVHEKLFPTE QIGINSRLLE MEHLLCKQPW
0601: GVRRIGIWGM PGIGKTTLAK AFFDQISGGY EASCFIKHFD KAFSGKGLHR LLEEHFGKIL KELPRVCSSI TRPSLPRDKL SKKRTLVVLD DVHNPLVAES
0701: FLEGFHWFGP GSLIIITSRD KQVFRLCQIN HVYEVQSFNE NEALQLFSQC AFRRDINEQN LLELSLKVID YASGNPLALS FYCRVLKGKE LSEMETTFFK
0801: LKQRTPYKIF DLFKSSYETL DDNEKNIFLD IACFFSGENV DYVMRLLEGC GFFPHVGIDV LVENCLVTIS ENRVKMHRII QDFGREIIDG ETVQIERRRR
0901: LSDPWSIKFL LEDDELEANE DPKATYTRTL GTEDIEGILL DTSNLTFDVK PGAFENMLSL RFLKIYCSSY ENHYSLRLPK GLKFLPDELR LLHWENYPLQ
1001: SLPQDFDPCH LVELNLSYSQ LQKLWAGTKS LEMLKVVKLC HSQQLTAIDD ILKAQNIELI DLQGCRKLQR FPATGQLQHL RVVNLSGCRE IKSFPEVSPN
1101: IEELHLQGTG IRELPISIVS LFEQAKLNRE LFNLLPEFSG VSNAWNNEQS TSLAKLVTST QNLGKLVCLN MKDCVHLRKL PYMVDFESLK VLNLSGCSDL
1201: DDIEGFPPNL KELYLVSTAL KELPQLPQSL EVLNAHGCVS LLSIPSNFER LPRYYTFSNC FALSASVVNE FVKNALTNVA HIAREKQELN KSLALNFTVP
1301: SPESKNITFD LQPGSSVIIQ LGSSWRLIRG FAILVEVAFL EEYQAGAFSI SCVCRWKDTE CVSHRLEKNF HCWIPGEGVP KDHMFVFCDF DMHLTACEGN
1401: DSSILADLVV FEFFTVNKQK KLLDGSCAVT RCGVHVFTAA NEDTSSSMTK PFSSSGYLQE IFDNEVEELR VIYDGLDEND RNLLLYMAYL NGEEADFLAP
1501: LIASTGLGIS SRLNVLANKS LINISPYGII VRQGLLKKIG REIVYRSVYL SSLNDTLPGS STVSLRLAAV KEPKVTTFKV PRVRSVKQDE FNAKINAFIS
1601: RFKQKPQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)