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AT4G36120.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.983
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant protein of unknown function (DUF869)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2); Has 41895 Blast hits to 24172 proteins in 1641 species: Archae - 536; Bacteria - 4817; Metazoa - 21606; Fungi - 3730; Plants - 2607; Viruses - 113; Other Eukaryotes - 8486 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JUQ2eggNOG:ENOG41106NREMBL:AK229393EMBL:AL022141
EMBL:AL022373EMBL:AL161588EMBL:CP002687EnsemblPlants:AT4G36120
EnsemblPlants:AT4G36120.1entrez:829769GeneID:829769Genevisible:O65649
Gramene:AT4G36120.1hmmpanther:PTHR31580hmmpanther:PTHR31580:SF4HOGENOM:HOG000243346
InParanoid:O65649InterPro:IPR008587KEGG:ath:AT4G36120ncoils:Coil
OMA:DALKECTPaxDb:O65649Pfam:O65649Pfam:PF05911
PhylomeDB:O65649PIR:T05505PRIDE:O65649PRO:PR:O65649
ProteinModelPortal:O65649Proteomes:UP000006548RefSeq:NP_195335.4TAIR:AT4G36120
UniGene:At.31350UniProt:O65649
Coordinates (TAIR10) chr4:-:17093213..17096573
Molecular Weight (calculated) 111887.00 Da
IEP (calculated) 6.31
GRAVY (calculated) -0.78
Length 996 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGRGWPWKR KSSDKATTEK PVVGIESTPV CSLSYLASLE NQEKCKNTNY VQITMDSYTH MSRMEDQVKL FEVQVKDLKE KLTLAHSEIN TKESLILQHA
101: KVAEEAVSGW EKADAETLAL KRQLESVTLL KLTAEDRASH LDDALKECTR QIRIVKEESD KKLQDVILAK TSQWDKIKAE LEGKIDELSE GLHRAASDNA
201: ALTRSLQERS EMIVRISEER SKAEADVEKL KTNLQLAEKE ISYLKYDLHV ASKEVEIRNE EKNMSLKSAD IANKQHLEGV KKIAKLEAEC HRLRGLLRKK
301: LPGPAAMAQM KLEVEGLGHE FTDPRAQRNM SQNHNAHIAK AEISTDHKLE ECKRENVYLT RRTLEMEEEI QTLKEHLSAR NNELQVSRNV CAKTLGKLKI
401: LEGQMHMFNN DKNAPKSNSR NLSESLSSGH DHHYPPSVTS VSEDGFDEEG SSSECGPATS LDSHKVRKVS VNGSSKPRSS SRLELMDDFL EIEKLVGSDP
501: DGANSASKSS NSVCSRRSVE KQSSSKSSEP DEDTTTLDQL LMVLRSRINR IFESQEGISI DKIVEAARFS IQEMQGSSTK RMSSHLFEVT DETLEKHVDI
601: QNSEKEQKNT KQQDLEAAVA NIHHFIKSTT KEATQLQDMN GNGQLRESLE DFSSSVSKYP TGESSLSDVM LELSRISVLA SNLNNGALTL KPHSKEIPVT
701: ESNDKVTLLF EESDSNPLGD TFAKTDHCVD NLINGDDSSC KSLLKEVEQL KLEKENIAVE LSRCLQNLES TKAWLEEKEQ LISKLKSQLT SSEDLQSLAE
801: TQLKCVTESY KSLDLHAKEL EAKVKSLEEE TKRLEMAFTT EKHGHEETLA KCRDLQEKMQ RNETCENCSS SKLQPNQEKD IVSATEKLAA CQETIHLLSQ
901: QLQSLQPQSN HILKSRSPEK KFQQHKASEV TPNSALDDLP HVHIIQPSRS VKHTVNPTVH AIMKSSSVSS SSKEDNEKHT RGLGRFFSSK SKNSAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)