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AT4G36150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (TIR-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G45250.1); Has 23119 Blast hits to 17172 proteins in 640 species: Archae - 16; Bacteria - 1087; Metazoa - 1782; Fungi - 109; Plants - 19291; Viruses - 8; Other Eukaryotes - 826 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:ENOG410JWIMEMBL:AL022141EMBL:AL161588
EMBL:CP002687EnsemblPlants:AT4G36150EnsemblPlants:AT4G36150.1entrez:829772
Gene3D:3.40.50.10140Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:829772
GO:GO:0007165GO:GO:0016021GO:GO:0043531Gramene:AT4G36150.1
hmmpanther:PTHR11017hmmpanther:PTHR11017:SF157HOGENOM:HOG000064702InterPro:IPR000157
InterPro:IPR002182InterPro:IPR011713InterPro:IPR011991InterPro:IPR027417
InterPro:IPR032675KEGG:ath:AT4G36150OMA:TCIRFSCPfam:PF00931
Pfam:PF01582Pfam:PF07725Pfscan:PS50104PhylomeDB:O65507
PIR:T04584PROSITE:PS50104Proteomes:UP000006548RefSeq:NP_195338.1
SMART:SM00255SMR:O65507STRING:3702.AT4G36150.1SUPFAM:SSF46785
SUPFAM:SSF52058SUPFAM:SSF52200SUPFAM:SSF52540TAIR:AT4G36150
TMHMM:TMhelixUniGene:At.54626UniProt:O65507
Coordinates (TAIR10) chr4:+:17104776..17108711
Molecular Weight (calculated) 134085.00 Da
IEP (calculated) 7.44
GRAVY (calculated) -0.17
Length 1179 amino acids
Sequence (TAIR10)
(BLAST)
0001: MVDYSSSSSS SVQLSPPQHQ VFLNFRGKQL RNGFVSHLEK ALRRDGINVF IDRNETKGRD LSNLFSRIQE SRIALAIFSS MYTESYWCLD ELVKIKDCVD
0101: LGTLVVIPIF YMVDTDDVKN LKGAFGYTFW KLAKTCNGEK LDKWKQALKD VPKKLGFTLS EMSDEGESIN QIVGEVIKVL SSDVMPDLER EIPIDDPFPT
0201: GEQVPEAAPD SPPPLFGIET RLKQLEEKLD FECKDTLTIG VVGMPGIGKT TLTSMLYEKW QHDFLRCVFL HDVRKMWKDC MMDRSIFIEE LLKDDNVNQE
0301: VADFSPESLK ALLLSKKSLV VLDNVSDKKQ IEVLLGESDW IKRGSRIFIT TSDRSVIEGM VDDTYEVLRL TGRDSFEYFS YFAFSGKLCP PVRTFMNLSR
0401: LFADYAKGNP LALKILGKEL NGKDKTHWEE KLSKLMQSPN KTIQDVLRVS YDELGLSHKD VFLDVACFFR SGDEYYVRCL VESCDTEAID TVSEIKDLAS
0501: KFLINISGGR VEMHDLLYTF GKELGSQGSR RLWNHKAVVG ALKNRVGAVR GIFLDMSELK KKLPLDRSTF IKMRNLRYLK FYSSRCDREC EADSKLNFPE
0601: GLEFPLDEIR YLYWLKFPLM KLPKDFNPKN LTDFNLPYSE IEELWEGAKD TQKLKWVDLS HSRKLCNLSG LLNAESLQRL NLEGCTSLEE LPREMKRMKS
0701: LIFLNMRGCT SLRVLPRMNL ISLKTLILTN CSSIQKFQVI SDNLETLHLD GTAIGKLPTD MVKLQKLIVL NLKDCKMLGA VPEFLGKLKA LQELVLSGCS
0801: KLKTFSVPIE TMKCLQILLL DGTALKEMPK LLRFNSSRVE DLPELRRGIN GLSSLRRLCL SRNNMISNLQ IDINQLYHLK WLDLKYCKNL TSIPLLPPNL
0901: EILDAHGCEK LKTVASPMAL LKLMEQVQSK FIFTNCNNLE QVAKNSITSY AQRKSQLDAR RCYKEGGVSE ALFIACFPGS DVPSWFNYQT FGSALRLKLP
1001: PHWCDNRLST IALCAVVTFP DTQDEINRFS IECTCEFKNE LGTCIRFSCT LGGSWIESRK IDSDHVFIGY TSSSHITKHL EGSLKLKEHD KCVPTEASIE
1101: FEVIDGAGEI VNCGLSLVYE EPNHVVVERN CKGASSRRDM SVGESILSIA AGYLSNVLRF LWLGVVFFMV YGFSKIFVK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)