AT4G36080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase (InterPro:IPR014009), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (TAIR:AT2G17930.1); Has 2274 Blast hits to 1876 proteins in 234 species: Archae - 0; Bacteria - 2; Metazoa - 856; Fungi - 668; Plants - 248; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17059996..17077628 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 433620.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.17 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 3834 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MSPIQNFEQH SRRLVEPDLP IEERLAMVVE VRDSLEITHT AEYLNFLKCY FRASSVILLQ ITKPQFTDNI EHKLRNIVVE ILNRLPHSEV LRPFVQDLLK 0101: VAMQVLTTDN EENGLICIRI IFDLLRNFRP TLENEVQPFL DFVCKIYQNF RLTVSHFFEN VKMEEVKPVE IPTPSDQSLS ITAPSRNGQI NPSTRSFKIV 0201: TESPLVVMFL FQLYSRLVQI NIPNLLPLMV AAISIPGPEK VSSHMKPQFI ELKGAQVKTV SFLTYLLKSC AEYIKPHEES ICKSIVNLLV TCSDSASIRK 0301: ELLVSLKHVL GTDFKRGLFP LIDTLLEERV LVGTGRACFE SLRPLAYSLL AEIVHHVRAD LSLSQLSRII YLFSRNMHDS TLSLNIHTTC ARLMLNLVEP 0401: IFEKGIDQQS MDEARILLGR ILDAFVGKFN TFKRTVPQLL EEGDGKDQIT LRSKLELPVQ AVLNLQVPAE HSKEVNDCKN LIKTLVMGMK TIIWSITHAH 0501: LPRPQGMHPQ ALASQSSVTQ VFKGMREDEV WKASGVLKSG VHCLALFKDK DEEKEMLNLF SQILAVMEPR DLMDMFSICM PELFECIIDN TQLVQIFATL 0601: LQAPKVYKPF ADVLINFLVS SKLDVLKNPD SAATKLILHL FRCLFGAVSK APSDFERILQ PQVPLIMEVC MKNATEVEKP LGYMQLLRTV FRGLAGCKFE 0701: LLLRDLVPML LPCLNILLTM LEGPAGEDMR DLLLELSLTL PARLSSLLPY LPRLMRPLVS CLRGSDELVS LGLRTLEFWV DSLNPDFLEP SMATVMSEVI 0801: LALWSHLKPV PYPWGGKALQ IVGKLGGRNR RFLKEPLTLE CKDNPEHGLR LVLTFEPSTP FLVPMDKFIN LAVAAVMQKN LTTEIYYKKQ ALKFLRVCLL 0901: SQLNLPGCVT DEGQTTKQLS TLLLSSVDSF WRRSESTEIE ADLGVKTKTQ LIAEKSIFKT LLITIIAASS DPDLSDSDDD FVVNICRHFA IILHGDYTSS 1001: YTSTSAGPLG GSLISTSSKP KNNWSTYLKQ LDPLIFLDAL VDVLADENRL HAKAALTSLN VFAETLLFLA RIKHADVLMA RGAHSASMIV SSPSTNPVYS 1101: PHPSVRIPVF EQLLPRLLHC CYGSTWQAQM GGVMGLGALV GKVNVETLCL FQVKIVRGLV YVQKRLPVYA SKEQDETSQV LIQILRVVNN VDEANNDARR 1201: QSFQDVVEYL ATELFNSNAS ITVRKNVQNC LALLASRTGS EVSELLEPLY QPLLQPLIMR PLRSKTIDQQ VGTVTALNFC LALRPPLLKV TPELVNFLQE 1301: ALQIAEADEA LWAVKLMSPK VLTSLNRLRT ACIEILCTTM AWADFRTQSH NELRAKIISM FFKSLTCRAP EIVTVAKEGL RQVINQQRMP KELLQSSLRP 1401: ILVNLAQTKN LNMPLLQGLA RLLELLSNWF NVTLGCKLLE HLKKWLEPEK LAQSQKSWKA GEEPKIAAAI IELFHLLPLA ASKFLDELVT LTIDLEAALP 1501: PGQVYSEINS PYRLPLTKFL NRYATLAVDY FLSRLSEPKY FRRFMYIIRS DAGQPLREEL AKSPHKILSY AFPEILPKSD AILSAAASTP PAASSGDEKP 1601: TPMKSESSNT PSTKSNVASD AYFQGLYLIK TMVKLIPSWL QSNRTIFDAL AHLWKSHART SRLQNEQNLT LVQVKESKWL VKCFLNYLRH EKSEMNVLFD 1701: VLLIFLFHSR IDYTFLREFY IIEVAEEYPP NMKKAIVLHF LNLFQSKQLG HDHLVQAMQM LILPMLAHAF QNGQTWEVID PDIVKTIVER LLDPPEEVSA 1801: EYDEPLRIEL LQLATLLLKY LQSDLVQHRK ELIKFGWNHL KREDSASKQW AFVNVCHFLD AYQAPEKIIL QVFVALLRTC QPENKMLVKQ ALDILMPALP 1901: KRLPLGDSRM PIWIRYTKKI LVEEGHSIPN LIHIFQLIVR HSDLFYSCRA QFVPQMVNSL SRLGLPYNTT AENRRLAIEL AGLVVSWERQ RQNESKMVTD 2001: GDATSEVSDG LHPSSGVDPK LSTAGSSISE DPSKRVKIEP GLPSLCVMSP GGASSIPNVE TPGSATQPDE EFKPNAAMEE LIINFLIRVA VVIEPKDREA 2101: NTMYKQALDF LSQALEVWPN ANVKFNYLEK LLSSMPPSQS DPSTALAQGL DVMNKVLEKQ PHLFIKNNIS QISQFLELSF KHKMLDAGKS LCSLLKMVFI 2201: AFPQDGASTP PEIKLLYQKV NELIQKHVHV VTASQASGDD NSLGSVSFVL VVLKTLAEVQ KHFLDPYVLV HILQRLSRDL GLAAGAHPRQ SQRIESESAD 2301: VGAVVSNIKL VLELIDERVM LLADCKRPVT QILNTLLSEK GTDSSLLLCV LDMLKRWAED DFGKKGSSGS SGAFLTQKDI VSFLQKLSQV DKQHFSSVAL 2401: DEWDKVYLQL LYGLCADSTK YPLALRQEIS LKVERHSMLG LRARDPDMRR KFFLLYHESL GNNLFARLQY IIQNQDWEAM SDVFWLKQGL DLLLAILIEE 2501: KPITLAPNSA RVVPLLPSQN PGVHHQPPVM PEGPEEVASM FDSIVMKHSQ FLSAASKLQV ADVVIPLREL AHTDANVAYH LWVLVFPIVW ATLHKEEQIA 2601: LAKPMISLLS KDYHKKQQGH RPNVVQALLE GLQLSHPQPR MPSELIKYIG KTYNAWHLAL TLLETHVMLF TNDSKCAESL AELYRLLNEE DRRFGLWKSR 2701: SITTESRAGF SMVQHGFWQR AQSLFYQAMV KATQGTYNNT VPKTEMCLWE EQWLHCATQL GQWDALVDFG KSTENYEILL DSLWKAPDWT YLKDHVIPKA 2801: QVEETPKLRL VQACFSLHEK NANGVGDAEN IVGKGVDLAL EQWWQLPEMS LHARVPLLQQ FQQLVEVQES SRIYVDIANG SKVPGNAAVG GQGNLYADLK 2901: DILETWRLRT PNEWDNMTVW YDMLQWRNEM YNVVIDAFKD FVTSNTPLHH LGYRDKAWNV NKLARIARKQ GLYDVCVQIL EKMYGHSQME VQEAFVKIKE 3001: QAKAHLETKG ELATGLNLVN STNLEFFLAK NKAEIFRLKG DFHLKLNDTE GANLAYSNAI TLFKNLPKGW ISWGNYCDMA YQDTQDEIWL EYAVSCFLQG 3101: IRFGVSNSRS HMARVLYLLS FDPTNEPVGR IFDKHLDQVP HWVWLSWIPQ LLISLQRTEA PHCKLVLMKI AAVFPQALYY WLRTYLLERR DAVNKSELSR 3201: VVLAQRMQQN VPGVSAGHGG GNLPSETQIH QGSQTSGAVG THDGGNLHVQ ESERATMINN VHSGNDQPMN QSSSMAISAA GAFDAAKDVM EALRSKHNNL 3301: ASELEVLLTE IGSRFVTLPE ERLLAVVNAL LHRCYKYPTA TTAEVPQPLK KELSGVCRAC FSADAVTKHV AFVREYKQDF ERDLDPESNS FPVTLADLTK 3401: KLKDWKNILQ SNVEDRFPVL LRLEDESKVL RDFNVVDVEI PGQYFADQEV APDHTVKLDR VGADIQIVRR HGSSCRRLTL IGSDGSQKHF IVQTSLTPNA 3501: RSDERILQLF RVMNQMFDKH KESRRRHLGL HTPIIIPVWS QVRMVEDDLM YNTFLEVYEN HCGRNGRESD LPITYFKEKL NQAITGQISP EAIGDLRLQA 3601: YGEITKNIVN DTIFSQYMYK TSMSGSHLWA FKKQFAVQLA VSNFMSFILQ IGGRSPNKIL FAKNSGKMFQ TDFHPSYDSN GMIELNEPVP FRLTRNMHAF 3701: LSHFGVEGPL MSNMCSASQA VFSSKQNEHL RYQLAMFFRD ELLSWFGRRP LGVPIPPVAG IATLSSPELK HKVNSNVDDV IGRIRGIAPQ YFSEEDENSV 3801: EPPQSVQRGV SELVEAALSP RNLCMMDPTW HPWF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)