AT4G34860.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.624 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Plant neutral invertase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 2 (TAIR:AT4G09510.1); Has 703 Blast hits to 700 proteins in 102 species: Archae - 0; Bacteria - 140; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:16609955..16612019 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 65040.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.51 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 571 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSSFNLSVDV NQNGNIKNVD SLSTLDDIDD IDFAKLLEKP RPLNIDRLRS LDERSLTELT GSPQLRNADN ASRAPDHADY VISPSFGRRS GFNTPRSQPG 101: FESHPMVGEA WDALRRSMVY FRGQPVGTIA AVDNSEEKLN YDQVFVRDFV PSALAFLMNG EPDIVKNFLL KTLRLQSWEK KIDRFQLGEG VMPASFKVFH 201: DPVRNHETLI ADFGESAIGR VAPVDSGFWW IILLRAYTKS TGDSSLADMP ECQKGIRLIL SLCLSEGFDT FPTLLCADGC CMIDRRMGVY GYPIEIQALF 301: FMALRCALLL LKHDGEGKEM VEQIVKRLHA LSYHMRSYFW LDLKQLNDIY RYKTEEYSHT AVNKFNVIPD SLPEWVFDFM PPHGGFFIGN VSPARMDFRW 401: FALGNCIAIL SSLATPEQST AIMDLIESRW EELVGEMPLK VCYPAIESHE WRIVTGCDPK NTRWSYHNGG SWPVLLWLLT AACIKTGRPQ IARRAIEVAE 501: ARLHKDHWPE YYDGKVGRYV GKQSRKNQTW SVAGYLVAKM MLEDPSHVGM VCLEEDKQMK PVMRRSNSWT C |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)