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AT1G62810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Predictors External Curations
no data
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Copper amine oxidase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Copper amine oxidase family protein; FUNCTIONS IN: primary amine oxidase activity, quinone binding, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT3G43670.1); Has 1558 Blast hits to 1554 proteins in 277 species: Archae - 14; Bacteria - 381; Metazoa - 247; Fungi - 454; Plants - 245; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G62810-MONOMERBioGrid:27801BRENDA:1.4.3.21EC:1.4.3.21
eggNOG:COG3733eggNOG:KOG1186EMBL:AC007190EMBL:AY149440
EMBL:BT004539EMBL:CP002684EnsemblPlants:AT1G62810EnsemblPlants:AT1G62810.1
entrez:842580Gene3D:2.70.98.20GeneID:842580Genevisible:Q8H1H9
GO:GO:0005507GO:GO:0006809GO:GO:0008131GO:GO:0009308
GO:GO:0009738GO:GO:0048038GO:GO:0052593GO:GO:0052594
GO:GO:0052595GO:GO:0052596Gramene:AT1G62810.1hmmpanther:PTHR10638
hmmpanther:PTHR10638:SF38HOGENOM:HOG000250947InParanoid:Q8H1H9InterPro:IPR000269
InterPro:IPR015798InterPro:IPR015800InterPro:IPR015802InterPro:IPR016182
KEGG:00260+1.4.3.21KEGG:00350+1.4.3.21KEGG:00360+1.4.3.21KEGG:00410+1.4.3.21
KEGG:00950+1.4.3.21KEGG:00960+1.4.3.21KEGG:ath:AT1G62810KO:K00276
OMA:GQTHEITPANTHER:PTHR10638PaxDb:Q8H1H9Pfam:PF01179
Pfam:PF02727Pfam:PF02728Pfam:Q8H1H9PhylomeDB:Q8H1H9
PRIDE:Q8H1H9PRO:PR:Q8H1H9PROSITE:PS01165ProteinModelPortal:Q8H1H9
Proteomes:UP000006548Reactome:R-ATH-211945RefSeq:NP_176469.1scanprosite:PS01165
SMR:Q8H1H9STRING:3702.AT1G62810.1SUPFAM:SSF49998SUPFAM:SSF54416
TAIR:AT1G62810TMHMM:TMhelixUniGene:At.36219UniProt:Q8H1H9
Coordinates (TAIR10) chr1:-:23258253..23261772
Molecular Weight (calculated) 80142.40 Da
IEP (calculated) 6.39
GRAVY (calculated) -0.30
Length 712 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEPSFARLF LLFFSFLLIF ATYSWVFGPD SGFLFGTRVR KTLGSNRQVH VDHSLEKPHH PLDPLTVREI NRVRTILSNH DPGFGSGSAT IHSMALDEPE
101: KSRVVQWKKG NKLLSRRAAV VAYWGGQTHE ITVDLDSGRV VSDVINRTSG YPILTLNDVF AASQVPLKSL EFNRSIEARG VKFSDLACIT PFAGWFGSEE
201: EGRRVIRVQC FTLQGTTNYF MRPLEGLYVT VDLDKLEVIK IIDKGPIPIP KASGTEYRFG VQNKPVHMDR INPISMEQPD GPSFRVEDGH LVKWANWVFH
301: VKADQRAGMI ISQATVRDSE TGEPRSVMYK GFPSELFVPY MDPEEGWYYK GYMDAGELGL GPTAMPLVPL NDCPRNSYYI DGVFASPDGK PIVQPNMICL
401: FERYAGDISW RHSEILFANA DIRESRPKVT LVARMATSVG NYDYIFDWEF QTDGLIRVTV AASGMLMVKG TPYDNVDDLG DREDDAGPLI SENVIGVVHD
501: HFITFHLDMD IDGPMNNSLV KVHLEKQRVP TGKSPRKSYL KVKKYIAKTE KDAQIKLSLY DPYEFHIVNP NRKSRVGNPA GYRIVPGGNA ASLLDHDDPP
601: QIRGAFTNNQ IWVTPYNRSE QYAGGVLIYQ SQGDDTLQVW SDRDRSIENK DIVLWYTLGF HHVPCQEDYP VMPTVAASFE LKPANFFESN PILGSAPFFE
701: KDLPVCRPFA SS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)