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AT2G21410.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:16461582 (2006): plant-type vacuole plant-type vacuole membrane
  • PMID:31932409 (2020): plastid
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30962257 (2019): plastid
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:24030099 (2013): plasma membrane
  • PMID:23990937 (2013): plasma membrane
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22923678 (2012): plant-type vacuole
  • PMID:22550958 (2012): plastid
  • PMID:22430844 (2012): Golgi
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): plant-type vacuole
  • PMID:15539469 (2004): plant-type vacuole
  • PMID:15215502 (2004): plant-type vacuole
  • PMID:15028209 (2004): plastid
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : vacuolar proton ATPase A2
Curator
Summary (TAIR10)
Vacuolar proton ATPase subunit VHA-a isoform 2. Localized in the tonoplast. Required for efficient nutrient storage but not for sodium accumulation.
Computational
Description (TAIR10)
vacuolar proton ATPase A2 (VHA-A2); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A3 (TAIR:AT4G39080.1); Has 2867 Blast hits to 2293 proteins in 720 species: Archae - 334; Bacteria - 1213; Metazoa - 663; Fungi - 202; Plants - 115; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink).
Protein Annotations
BioGrid:2033eggNOG:COG1269eggNOG:KOG2189EMBL:AC006841
EMBL:AF424556EMBL:AK221420EMBL:AY053417EMBL:AY099690
EMBL:AY124855EMBL:CP002685EnsemblPlants:AT2G21410EnsemblPlants:AT2G21410.1
entrez:816680GeneID:816680Genevisible:Q9SJT7GO:GO:0000220
GO:GO:0000325GO:GO:0005739GO:GO:0005773GO:GO:0005774
GO:GO:0005794GO:GO:0007035GO:GO:0009507GO:GO:0009678
GO:GO:0009705GO:GO:0015986GO:GO:0015991GO:GO:0016020
GO:GO:0016021GO:GO:0016471GO:GO:0032119GO:GO:0043181
GO:GO:0045735GO:GO:0046961GO:GO:0051117GO:GO:0070072
Gramene:AT2G21410.1hmmpanther:PTHR11629hmmpanther:PTHR11629:SF69HOGENOM:HOG000037059
InParanoid:Q9SJT7InterPro:IPR002490InterPro:IPR026028iPTMnet:Q9SJT7
KEGG:ath:AT2G21410KO:K02154ncoils:CoilOMA:FFASAHR
PANTHER:PTHR11629PaxDb:Q9SJT7Pfam:PF01496Pfam:Q9SJT7
PhylomeDB:Q9SJT7PIR:H84600PIRSF:PIRSF001293PRIDE:Q9SJT7
PRO:PR:Q9SJT7ProteinModelPortal:Q9SJT7Proteomes:UP000006548Reactome:R-ATH-77387
Reactome:R-ATH-917977RefSeq:NP_179736.1SMR:Q9SJT7STRING:3702.AT2G21410.1
SwissPalm:Q9SJT7TAIR:AT2G21410tair10-symbols:VHA-A2TMHMM:TMhelix
UniGene:At.14067UniProt:Q9SJT7
Coordinates (TAIR10) chr2:+:9162703..9168141
Molecular Weight (calculated) 93110.90 Da
IEP (calculated) 5.24
GRAVY (calculated) 0.05
Length 821 amino acids
Sequence (TAIR10)
(BLAST)
001: MAESHGGGGG CCPPMDLMRS EPMQLVQVIV PMESAHLTVS YLGDLGLVQF KDLNSEKSPF QRTYAAQIKR CGEMARKIRF FKEQMSKAGV TPKETLDREN
101: DIDLDDVEVK LEELEAELVE INANNDKLQR SYNELVEYKL VLEKAGEFFA SAHRSATAQQ SEIETEQVGE DLLEAPLLQE EKSVDPTKQV KLGFLTGLVP
201: REKSMVFERI LFRATRGNIF IRQSVIEESV VDPNSGEKAE KNVFVVFYSG ERAKSKILKI CEAFGANRYP FSEDLGKQAQ MMTEVSGRLS ELKTTIGAGL
301: DQRNILLETI GDKFEQWNLK IRKEKAIYHT LNMLSLDVTK KCLVGEGWSP VFAATEIQDA LHRAAVDSNS QVGSIFQVLR TKEMPPTFFR TNKFTTAFQE
401: IVDAYGVAKY QEANPSVFTI VTFPFLFAVM FGDWGHGICL LLATMYLILR EKKLSSQKLG DIMEMAFGGR YVIFMMSLFS IYTGLIYNEF FSIPYPLFAS
501: SAYDCRDVSC SEATTIGLIK TRDTYPFGVD PVWHGTRSEL PFLNSLKMKM SILIGVAQMN LGIIMSFFNA KFFKSAVNIW FQFVPQMIFL NCLFGYLSVL
601: IIIKWCTGSQ ADLYHVMIYM FLSPMDDLGE NQLFPNQKIV QLTFLFLALV SVPWMLLPKP FILKKQHEAR HQGLSYAQLD ETDESLQVET NGGGHGHEEF
701: EFSEIFVHQL IHTIEFVLGA VSNTASYLRL WALSLAHSEL SSVFYEKVLL MAWGFNNVFI WIVGILVFIF ATVGVLLVME TLSAFLHALR LHWVEYQNKF
801: YEGDGYKFAP FTFTLVGNED E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)