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AT1G44760.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Adenine nucleotide alpha hydrolases-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT1G69080.1); Has 216 Blast hits to 216 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 214; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWIKeggNOG:ENOG410YI8JEMBL:AC020576EMBL:AY063862
EMBL:BT006061EMBL:CP002684EnsemblPlants:AT1G44760EnsemblPlants:AT1G44760.1
entrez:841040Gene3D:3.40.50.620GeneID:841040GO:GO:0006950
GO:GO:0016787Gramene:AT1G44760.1hmmpanther:PTHR31964hmmpanther:PTHR31964:SF37
HOGENOM:HOG000238524InterPro:IPR006016InterPro:IPR014729KEGG:ath:AT1G44760
OMA:RRGSKRWPfam:PF00582PhylomeDB:Q9LPF5PIR:E96506
Proteomes:UP000006548RefSeq:NP_175097.1STRING:3702.AT1G44760.1SUPFAM:SSF52402
TAIR:AT1G44760UniGene:At.27173UniProt:Q9LPF5
Coordinates (TAIR10) chr1:-:16896894..16898427
Molecular Weight (calculated) 23083.80 Da
IEP (calculated) 9.33
GRAVY (calculated) -0.18
Length 213 amino acids
Sequence (TAIR10)
(BLAST)
001: MQFSRNSILR QLSRKEGWRS ASKRWTSGDS STAFNDDTSG GGYSSMEGLY GVYSGGDTAA RSKRVMVVVD ESSRSKHAMM WALTHLTNKG DLVTLLHVVS
101: PDDEATPSLA QSLGSLCKAC KPEVDVEALV IQGPKLATVL SQVKKLEVSV LVLGQKKSAP LISCLCGPSR SEELVNRCIN GADCLTIGVR KQCKGVGGYL
201: INTRWQKNFW LLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)