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AT4G33910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G23096.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G33910-MONOMERBioGrid:14817EC:1.14.11.2eggNOG:ENOG410XS5J
eggNOG:KOG1591EMBL:AL031032EMBL:AL161584EMBL:AY064069
EMBL:AY086254EMBL:AY096377EMBL:CP002687EnsemblPlants:AT4G33910
EnsemblPlants:AT4G33910.1entrez:829535GeneID:829535Genevisible:Q8VZJ7
GO:GO:0004656GO:GO:0005506GO:GO:0005789GO:GO:0005794
GO:GO:0016021GO:GO:0031418Gramene:AT4G33910.1hmmpanther:PTHR10869
hmmpanther:PTHR10869:SF66HOGENOM:HOG000096858InParanoid:Q8VZJ7InterPro:IPR005123
InterPro:IPR006620KEGG:ath:AT4G33910KO:K00472OMA:FNPTEYG
PaxDb:Q8VZJ7Pfam:PF13640Pfam:Q8VZJ7Pfscan:PS51471
PhylomeDB:Q8VZJ7PIR:T05219PRIDE:Q8VZJ7PRO:PR:Q8VZJ7
PROSITE:PS51471ProteinModelPortal:Q8VZJ7Proteomes:UP000006548RefSeq:NP_567941.1
SMART:SM00702SMR:Q8VZJ7STRING:3702.AT4G33910.1TAIR:AT4G33910
TMHMM:TMhelixUniGene:At.22140UniProt:Q8VZJ7
Coordinates (TAIR10) chr4:-:16256943..16258614
Molecular Weight (calculated) 32280.50 Da
IEP (calculated) 8.44
GRAVY (calculated) -0.41
Length 288 amino acids
Sequence (TAIR10)
(BLAST)
001: MKSRLKSYRR KKLGLATVIV FCSLCFLFGF YGSTLLSQNV PRVKPRLRML DMVENGEEEA SSMPHGVTGE ESIGSIPFQV LSWRPRAIYF PNFATAEQCQ
101: AIIERAKVNL KPSALALRKG ETAENTKGTR TSSGTFISAS EESTGALDFV ERKIARATMI PRSHGESFNI LRYELGQKYD SHYDVFNPTE YGPQSSQRIA
201: SFLLYLSDVE EGGETMFPFE NGSNMGIGYD YKQCIGLKVK PRKGDGLLFY SVFPNGTIDQ TSLHGSCPVT KGEKWVATKW IRDQDQEE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)