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AT5G24430.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Calcium-dependent protein kinase (CDPK) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT3G49370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G24430-MONOMEREC:2.7.11.1eggNOG:ENOG410XRMJeggNOG:KOG0032
EMBL:AB016884EMBL:AB025641EMBL:AF130252EMBL:AK221965
EMBL:AY128408EMBL:CP002688EnsemblPlants:AT5G24430EnsemblPlants:AT5G24430.1
entrez:832514Gene3D:1.10.238.10GeneID:832514Genevisible:Q9FIM9
GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0009506
GO:GO:0046777GO:GO:0046872Gramene:AT5G24430.1hmmpanther:PTHR24349
hmmpanther:PTHR24349:SF90HOGENOM:HOG000233030InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009InterPro:IPR011992InterPro:IPR017441iPTMnet:Q9FIM9
KEGG:ath:AT5G24430OMA:KFYDVYEPaxDb:Q9FIM9Pfam:PF00069
Pfam:Q9FIM9Pfscan:PS50011PhylomeDB:Q9FIM9PRIDE:Q9FIM9
PRO:PR:Q9FIM9PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q9FIM9Proteomes:UP000006548RefSeq:NP_197831.3scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9FIM9STRING:3702.AT5G24430.1
SUPFAM:SSF47473SUPFAM:SSF56112TAIR:AT5G24430UniGene:At.28684
UniProt:Q9FIM9
Coordinates (TAIR10) chr5:-:8339390..8342913
Molecular Weight (calculated) 66517.60 Da
IEP (calculated) 8.44
GRAVY (calculated) -0.37
Length 594 amino acids
Sequence (TAIR10)
(BLAST)
001: MGHCYSRNIS AVEDDEIPTG NGEVSNQPSQ NHRHASIPQS PVASGTPEVN SYNISPFQSP LPAGVAPSPA RTPGRKFKWP FPPPSPAKPI MAALRRRRGA
101: PPQPRDEPIP EDSEDVVDHG GDSGGGERLD KNFGFGKNFE GKYELGKEVG RGHFGHTCWA KAKKGKMKNQ TVAVKIISKA KMTSTLSIED VRREVKLLKA
201: LSGHRHMVKF YDVYEDADNV FVVMELCEGG ELLDRILARG GRYPEVDAKR ILVQILSATA FFHLQGVVHR DLKPENFLFT SRNEDAILKV IDFGLSDFIR
301: YDQRLNDVVG SAYYVAPEVL HRSYSTEADM WSIGVISYIL LCGSRPFYGR TESAIFRCVL RANPNFEDMP WPSISPTAKD FVKRLLNKDH RKRMTAAQAL
401: AHPWLRDENP GLLLDFSVYK LVKSYIRASP FRRSALKALS KAIPDEELVF LKAQFMLLDP KDGGLSLNCF TMALTRYATD AMMESRLPDI LNTMQPLAQK
501: KLDFEEFCAA AVSVYQLEAL EEWEQIATSA FEHFEHEGNR IISVQELAGE MSVGPSAYPL LKDWIRSSDG KLSFLGYAKF LHGVTVRSSS SRPR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)