AT3G45040.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.990 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : phosphatidate cytidylyltransferase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a putative dolichol kinase. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, dolichol kinase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 410 Blast hits to 408 proteins in 217 species: Archae - 14; Bacteria - 44; Metazoa - 111; Fungi - 131; Plants - 43; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:16472801..16475702 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63139.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.21 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.78 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 569 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKTTATSFVT GERVVVFVVV SRILLSLPLS LISHGFSLFL LSLSAFLVEI RVETSPFLLS HFSSRRGASS GILLGAVTLP SVMISKLVQL SRAISIHEAE 101: QDELAHVTMQ YWAASASCCA ILIYLSVIMS QVRKDESLSS SSIWLTRVSL TGTVLYGVAC FVSLSMISHT GLNTSLKMLW MLFHGLAAVK LIRHLLCTFP 201: SCASIGEALL VTSGLVLYFG DFLACTIAKI FEKLIPVDLV SISYGIKRTE TGIIVQGLLL GLLLFPMVFR FVLHIYESSL RKRDARQRNC SDAAKSVLFF 301: VSLLFFMVVA VPSWMQFVHD FNQHPFLWVL TFVFSEPLKR LSLCIYWILL IVVSVSRFYN ISRSSKVERI LLRKYYHLMA VLMFLPALVL QPKFLDLAFG 401: AALAVFVALE IIRIWRIQPL GEPLHQFMNA FTDHRDSEHL IVSHFSLLLG CALPIWMSSG FNDRALSPFA GILSLGIGDT MASMVGHKYG VLRWSKTGKK 501: TVEGTAAGIT SMMAVCFVLV PILASMGYIL SQGWWSLLVA VTATGMLEAY TAQLDNAFIP LVFYSLLCL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)