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AT4G33460.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ABC transporter family protein
Curator
Summary (TAIR10)
member of NAP subfamily
Computational
Description (TAIR10)
ATNAP13; FUNCTIONS IN: transporter activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 407040 Blast hits to 369976 proteins in 3957 species: Archae - 7271; Bacteria - 322720; Metazoa - 9258; Fungi - 6631; Plants - 5055; Viruses - 23; Other Eukaryotes - 56082 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-239-MONOMERBioGrid:14767eggNOG:COG1122eggNOG:ENOG410INJ1
EMBL:AK220760EMBL:AL035678EMBL:AL161583EMBL:AY142518
EMBL:BT010649EMBL:CP002687EnsemblPlants:AT4G33460EnsemblPlants:AT4G33460.1
entrez:829483Gene3D:3.40.50.300GeneID:829483Genevisible:Q8H1R4
GO:GO:0005215GO:GO:0005524GO:GO:0009941GO:GO:0016887
Gramene:AT4G33460.1hmmpanther:PTHR24220InParanoid:Q8H1R4InterPro:IPR003439
InterPro:IPR003593InterPro:IPR017871InterPro:IPR027417KEGG:ath:AT4G33460
OMA:SIISITHPaxDb:Q8H1R4Pfam:PF00005Pfam:Q8H1R4
Pfscan:PS50893PhylomeDB:Q8H1R4PIR:T05997PRIDE:Q8H1R4
PRO:PR:Q8H1R4PROSITE:PS00211PROSITE:PS50893ProteinModelPortal:Q8H1R4
Proteomes:UP000006548RefSeq:NP_195072.2scanprosite:PS00211SMART:SM00382
SMR:Q8H1R4STRING:3702.AT4G33460.1SUPFAM:SSF52540TAIR:AT4G33460
tair10-symbols:ATNAP13tair10-symbols:EMB2751UniGene:At.31581UniProt:Q8H1R4
Coordinates (TAIR10) chr4:-:16098325..16100113
Molecular Weight (calculated) 29625.90 Da
IEP (calculated) 8.58
GRAVY (calculated) -0.05
Length 271 amino acids
Sequence (TAIR10)
(BLAST)
001: MNGHCLFAAS PPRLFPLRSI SSSVSPSGSY RIKFSDNVAV ECRNLCFSVS TRQGISVPIL RDCSFRIPSG QLWMILGPNG CGKSTLLKIL AGVVNPSSGT
101: VFVEKPKNFV FQNPDHQVVM PTVEADVAFG LGKYHDMNQE EVKSRVIKAL EAVGMRDYMQ RPIQTLSGGQ KQRIAIAGAL AEACKVLLLD ELTTFLDESD
201: QMGVIKAVKD LINAKKGDVT ALWVTHRLEE LKYADGAVYM ENGRVVRHGD AATISDFIKA KQSSYIDQIG S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)