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AT4G31550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : WRKY DNA-binding protein 11
Curator
Summary (TAIR10)
member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.
Computational
Description (TAIR10)
WRKY DNA-binding protein 11 (WRKY11); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 17 (TAIR:AT2G24570.1); Has 3379 Blast hits to 2932 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3363; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Protein Annotations
BioGrid:14568eggNOG:ENOG410IKYYeggNOG:ENOG410YD1EEMBL:AF404856
EMBL:AL080283EMBL:AL161579EMBL:AY059731EMBL:AY084855
EMBL:AY150394EMBL:BT001100EMBL:CP002687EnsemblPlants:AT4G31550
EnsemblPlants:AT4G31550.1entrez:829282Gene3D:2.20.25.80GeneID:829282
Genevisible:Q9SV15GO:GO:0003700GO:GO:0005516GO:GO:0005634
GO:GO:0006351GO:GO:0010200GO:GO:0042742GO:GO:0043565
hmmpanther:PTHR31282hmmpanther:PTHR31282:SF15HOGENOM:HOG000029200InParanoid:Q9SV15
IntAct:Q9SV15InterPro:IPR003657InterPro:IPR018872iPTMnet:Q9SV15
KEGG:ath:AT4G31550MINT:MINT-1339027OMA:RCLEHEHPaxDb:Q9SV15
Pfam:PF03106Pfam:PF10533Pfam:Q9SV15Pfscan:PS50811
PhylomeDB:Q9SV15PIR:T10685PRO:PR:Q9SV15PROSITE:PS50811
ProteinModelPortal:Q9SV15Proteomes:UP000006548RefSeq:NP_567878.2RefSeq:NP_849559.1
SMART:SM00774SMR:Q9SV15STRING:3702.AT4G31550.1SUPFAM:0050605
SUPFAM:SSF118290TAIR:AT4G31550tair10-symbols:ATWRKY11tair10-symbols:WRKY11
UniGene:At.24683UniProt:Q9SV15
Coordinates (TAIR10) chr4:-:15290065..15291458
Molecular Weight (calculated) 35806.50 Da
IEP (calculated) 10.22
GRAVY (calculated) -0.58
Length 325 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVDLMRFPK IDDQTAIQEA ASQGLQSMEH LIRVLSNRPE QQHNVDCSEI TDFTVSKFKT VISLLNRTGH ARFRRGPVHS TSSAASQKLQ SQIVKNTQPE
101: APIVRTTTNH PQIVPPPSSV TLDFSKPSIF GTKAKSAELE FSKENFSVSL NSSFMSSAIT GDGSVSNGKI FLASAPLQPV NSSGKPPLAG HPYRKRCLEH
201: EHSESFSGKV SGSAYGKCHC KKSRKNRMKR TVRVPAISAK IADIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTFRGCPAR KHVERALDDP AMLIVTYEGE
301: HRHNQSAMQE NISSSGINDL VFASA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)