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AT1G07630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.917
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : pol-like 5
Curator
Summary (TAIR10)
Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.
Computational
Description (TAIR10)
pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G07630-MONOMEREC:3.1.3.16eggNOG:COG0631eggNOG:KOG0700
EMBL:AC007583EMBL:AF361615EMBL:AY084887EMBL:AY133603
EMBL:CP002684EnsemblPlants:AT1G07630EnsemblPlants:AT1G07630.1entrez:837276
Gene3D:3.60.40.10GeneID:837276Genevisible:Q9LQN6GO:GO:0004722
GO:GO:0005634GO:GO:0005886GO:GO:0046872GO:GO:0048366
Gramene:AT1G07630.1hmmpanther:PTHR13832hmmpanther:PTHR13832:SF228HOGENOM:HOG000239375
InParanoid:Q9LQN6InterPro:IPR001932InterPro:IPR015655iPTMnet:Q9LQN6
KEGG:ath:AT1G07630ncoils:CoilOMA:ERANTIPPANTHER:PTHR13832
PaxDb:Q9LQN6Pfam:PF00481Pfam:Q9LQN6Pfscan:PS51746
PhylomeDB:Q9LQN6PIR:G86210PRIDE:Q9LQN6PRO:PR:Q9LQN6
PROSITE:PS51746ProteinModelPortal:Q9LQN6Proteomes:UP000006548RefSeq:NP_563791.1
SMART:SM00332SMR:Q9LQN6STRING:3702.AT1G07630.1SUPFAM:SSF81606
TAIR:AT1G07630tair10-symbols:PLL5UniGene:At.43724UniGene:At.72523
UniProt:Q9LQN6
Coordinates (TAIR10) chr1:+:2349189..2351437
Molecular Weight (calculated) 74278.20 Da
IEP (calculated) 5.04
GRAVY (calculated) -0.52
Length 662 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNGVTKLSI CFTGGGGERL RPKDISVLLP DPLDEGLGHS FCYVRPDPTL ISSSKVHSEE DTTTTTFRTI SGASVSANTA TPLSTSLYDP YGHIDRAAAF
101: ESTTSFSSIP LQPIPKSSGP IVLGSGPIER GFLSGPIERG FMSGPLDRVG LFSGPLDKPN SDHHHQFQRS FSHGLALRVG SRKRSLVRIL RRAISKTMSR
201: GQNSIVAPIK SVKDSDNWGI RSEKSRNLHN ENLTVNSLNF SSEVSLDDDV SLENQNLQWA QGKAGEDRVH VVVSEEHGWL FVGIYDGFNG PDAPDYLLSH
301: LYPVVHRELK GLLWDDSNVE SKSQDLERSN GDESCSNQEK DETCERWWRC EWDRESQDLD RRLKEQISRR SGSDRLTNHS EVLEALSQAL RKTEEAYLDT
401: ADKMLDENPE LALMGSCVLV MLMKGEDIYV MNVGDSRAVL GQKSEPDYWL AKIRQDLERI NEETMMNDLE GCEGDQSSLV PNLSAFQLTV DHSTNIEEEV
501: ERIRNEHPDD VTAVTNERVK GSLKVTRAFG AGFLKQPKWN NALLEMFQID YVGKSPYINC LPSLYHHRLG SKDRFLILSS DGLYQYFTNE EAVSEVELFI
601: TLQPEGDPAQ HLVQELLFRA AKKAGMDFHE LLEIPQGERR RYHDDVSIVV ISLEGRMWKS CV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)