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AT4G29540.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : bacterial transferase hexapeptide repeat-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
bacterial transferase hexapeptide repeat-containing protein; FUNCTIONS IN: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity, transferase activity; INVOLVED IN: lipid biosynthetic process; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (InterPro:IPR010137); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G05210.1); Has 13439 Blast hits to 13165 proteins in 2031 species: Archae - 84; Bacteria - 8805; Metazoa - 8; Fungi - 21; Plants - 66; Viruses - 3; Other Eukaryotes - 4452 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT4G29540EnsemblPlants:AT4G29540.1entrez:829075hmmpanther:PTHR23416
hmmpanther:PTHR23416:SF8KEGG:00540+2.3.1.129Pfam:PF00132Pfam:PF13720
unipathway:UPA00359
Coordinates (TAIR10) chr4:+:14497775..14499765
Molecular Weight (calculated) 36458.70 Da
IEP (calculated) 7.50
GRAVY (calculated) -0.07
Length 334 amino acids
Sequence (TAIR10)
(BLAST)
001: MISLLKAREK LLSPLVSSTI RRLSSSLSYS REDSRDSEVL IHPSAVVHPN AVIGKGVSVG PYCTIGSSVK LGNGCKLYPS SHVFGNTELG ESCVLMTGAV
101: VGDELPGYTF IGCNNIIGHH AVVGVKCQDL KYKHGDECFL CIGNNNEIRE FCSIHRSSKP SDKTVIGDNN LIMGSCHIAH DCKIGDRNIF ANNTLLAGHV
201: VVEDNTHTAG ASVVHQFCHI GSFAFIGGGS VVSQDVPKYM MVAGERAELR GLNLEGLRRN GFTMSEMKSL RAAYRKIFMS TETVSLSFEE RLTELDQELY
301: SVPAVSAMLQ SIRDSFTESR RGICKFRQWL DSTT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)