suba logo
AT4G04190.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IK5EeggNOG:ENOG410Y4GIEMBL:BT028943EMBL:CP002687
EnsemblPlants:AT4G04190EnsemblPlants:AT4G04190.1EnsemblPlants:AT4G04190.2entrez:825734
GeneID:825734Gramene:AT4G04190.1Gramene:AT4G04190.2hmmpanther:PTHR36047
hmmpanther:PTHR36047:SF1HOGENOM:HOG000237597KEGG:ath:AT4G04190ncoils:Coil
OMA:KQCAEKRPhylomeDB:Q0IGH7Proteomes:UP000006548RefSeq:NP_192328.2
RefSeq:NP_974510.1TAIR:AT4G04190UniGene:At.50320UniProt:Q0IGH7
Coordinates (TAIR10) chr4:+:2024873..2026330
Molecular Weight (calculated) 21250.50 Da
IEP (calculated) 5.85
GRAVY (calculated) -0.59
Length 184 amino acids
Sequence (TAIR10)
(BLAST)
001: MDVDSQPMME ETILVGDDLM TGPPSPVIPP EIASHVLEGV DLCDGILRNL FLCLQINDIE PFCQDELALY RQCAEKRDKI LRVRLQESEH KLGLSMPIEL
101: AKERITQLEA EATSFERHLI LASGAEGIEG FRRRWSLHGR MTDTKKRLES LKQGMENRNK VEHEHNQHHD QSPKPSAPKR WFFW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)