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AT1G72420.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NADH:ubiquinone oxidoreductase intermediate-associated protein 30
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NADH:ubiquinone oxidoreductase intermediate-associated protein 30; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857); BEST Arabidopsis thaliana protein match is: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (TAIR:AT1G17350.1); Has 543 Blast hits to 543 proteins in 193 species: Archae - 0; Bacteria - 127; Metazoa - 111; Fungi - 89; Plants - 98; Viruses - 0; Other Eukaryotes - 118 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQPBeggNOG:KOG2435EMBL:CP002684EnsemblPlants:AT1G72420
EnsemblPlants:AT1G72420.1entrez:843574GeneID:843574Gramene:AT1G72420.1
hmmpanther:PTHR13194InParanoid:F4IDC0InterPro:IPR008979InterPro:IPR013857
KEGG:ath:AT1G72420KO:K18159OMA:AEDNSWQPaxDb:F4IDC0
Pfam:PF08547PRIDE:F4IDC0ProteinModelPortal:F4IDC0Proteomes:UP000006548
RefSeq:NP_177386.2STRING:3702.AT1G72420.1SUPFAM:SSF49785TAIR:AT1G72420
UniGene:At.35102UniProt:F4IDC0
Coordinates (TAIR10) chr1:-:27261367..27263186
Molecular Weight (calculated) 25487.00 Da
IEP (calculated) 6.53
GRAVY (calculated) -0.45
Length 228 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRFRSLWQA SVNATKKALT WELEEWVPPV EKCIFKFNSK EDLKTWHLYS DSEYGGLSSA SLEIKDGGNR SDCNGVFSGN LSTDMREGSK WNINRSGFCG
101: MRSKKFDGFI DLEGYDSIAL RLKGDGRCYI STIYTENWVN SPGQAEDNSW QAFVFAPKGN WYTAKVPLTR YLPTWKGNVI DAEMEMNPGH VVGMSLSVNA
201: QGGGFIGAKS GAGDFQVEID WIKAVRMP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)