AT4G24480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.964 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G03730.1); Has 116789 Blast hits to 115063 proteins in 4587 species: Archae - 100; Bacteria - 12435; Metazoa - 44447; Fungi - 10166; Plants - 32138; Viruses - 424; Other Eukaryotes - 17079 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12650410..12654755 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 107216.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.62 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 956 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPHRTTYFFP RQFPDRGFDS FSLKNDHDKK KSSSNVGESF GFQRDNKSNG VGEDSNKEKE STVFSSNPLL SKSSAVSDLF SDDRKSEKKH QQQLAAFYEW 101: LAEKKANLSR SSSTTTTHGR GVKPTRFSMS SDADEERELL LSSPADPAPL PATSSPDSII DSARTVNIHE RNIDRSFDRE VSLPRMSSES SFAGSFFSGT 201: TVDGNFSNFS SHTDARETST TTLVSVNKEE EEVEVREQGK EQSLAQKSRE GYYLQVTLAK WLSSQANLAC ESVHIQSTES ISYRFWVSGC LSYSDKISDG 301: FYSILGMDPY LWLMCNNSED GKRIPSLLLL KETEPNDTSM EVVLIDRRED SRLKELEDKA HELYCSSDNM LVLVEKLGRL VAVYMGGNFQ VEQGDLQKRW 401: KLVSNRLKEF RKCIILPIGS LTMGLCRHRA ILFKKLADYI GLPCRIARGC RYCKESHQSS CLVKIDDDRK LSREYVVDLI GEPGNVHDPD SSINGETQCQ 501: IPSPLQMSHL TDFSRPCVHS TSPCQTVESK TSRTLSENIQ RSGSQGQVHK EFELPDNAGT VCCAHIDQTC CAKVSSMVLT ESVLRALPLD IPNLSEEKIA 601: PQETCKEETV LLEDPTAMKQ PNLSVEPEIV EADTRKDKKG RLPVDAISPY LTIEPSLASD WLEVSWNELH IKERVGAGSF GTVHRAEWHG SDVAVKILSI 701: QDFHDDQFRE FLREVCKQAV AIMKRVRHPN VVLFMGAVTE RPRLSIITEY LPRGSLFRLI HRPASGELLD QRRRLRMALD VAKGLNYLHC LNPPVVHWDL 801: KSPNLLVDKN WTVKVCDFGL SRFKANTFIP SKSVAGTPEW MAPEFLRGEP TNEKSDVYSF GVVLWELITL QQPWNGLSPA QVVGAVAFQN RRLIIPPNTS 901: PVLVSLMEAC WADEPSQRPA FGSIVDTLKK LLKSPVQLIQ MGGDKGVIPT KSAPIL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)