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AT3G17070.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.814
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peroxidase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxidase family protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G40150.1); Has 4731 Blast hits to 4708 proteins in 320 species: Archae - 0; Bacteria - 4; Metazoa - 13; Fungi - 403; Plants - 4233; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G17070-MONOMEREC:1.11.1.7eggNOG:ENOG410IKVDeggNOG:ENOG4110HCC
EMBL:AB026636EMBL:AY085510EMBL:CP002686EnsemblPlants:AT3G17070
EnsemblPlants:AT3G17070.1entrez:820964GeneID:820964Genevisible:Q9LSP0
GO:GO:0004601GO:GO:0005576GO:GO:0006979GO:GO:0020037
GO:GO:0042744GO:GO:0046872Gramene:AT3G17070.1hmmpanther:PTHR31235
hmmpanther:PTHR31235:SF15HOGENOM:HOG000237556InterPro:IPR000823InterPro:IPR002016
InterPro:IPR010255KEGG:00940+1.11.1.7KEGG:ath:AT3G17070KO:K00430
OMA:GIRKRELPaxDb:Q9LSP0PeroxiBase:122Pfam:PF00141
Pfam:Q9LSP0Pfscan:PS50873Pfscan:PS51257PhylomeDB:Q9LSP0
PRIDE:Q9LSP0PRINTS:PR00458PRINTS:PR00461PRO:PR:Q9LSP0
PROSITE:PS50873ProteinModelPortal:Q9LSP0Proteomes:UP000006548RefSeq:NP_566565.1
SMR:Q9LSP0STRING:3702.AT3G17070.1SUPFAM:SSF48113TAIR:AT3G17070
UniGene:At.38797UniProt:Q9LSP0
Coordinates (TAIR10) chr3:+:5821048..5823165
Molecular Weight (calculated) 36808.60 Da
IEP (calculated) 4.59
GRAVY (calculated) -0.07
Length 339 amino acids
Sequence (TAIR10)
(BLAST)
001: MKPKSKVAES TAASCFLVMS LLCSCIIGDQ METNNEGLSY SYYEKTCPKV EEIVRSSLSS MFILDPTSPA ALLRLMFHDC QVQGCDASIL LEPIRDQQFT
101: ELDSAKNFGI RKRDLVGSIK TSLELECPKQ VSCSDVIILA ARDAVALTGG PLISVPLGRK DSLSTPSKHV ADSELPPSTA DVDTTLSLFA NKGMTIEESV
201: AIMGAHTIGV THCNNVLSRF DNANATSENM DPRFQTFLRV ACPEFSPTSQ AAEATFVPND QTSVIFDTAY YDDAIAGRGN LRIDSEIGAD PRTRPFVEAF
301: AADQDRFFNA FSSAFVKLSS YKVLTGNEGV IRSVCDKVD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)