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AT4G21720.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.338
endoplasmic reticulum 0.229
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 2692 Blast hits to 975 proteins in 186 species: Archae - 4; Bacteria - 460; Metazoa - 658; Fungi - 93; Plants - 1089; Viruses - 100; Other Eukaryotes - 288 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZCJeggNOG:ENOG410YK14EMBL:AK175223EMBL:AL035527
EMBL:AL161555EMBL:BT010603EMBL:CP002687EnsemblPlants:AT4G21720
EnsemblPlants:AT4G21720.1entrez:828260ExpressionAtlas:Q9SVS5GeneID:828260
Gramene:AT4G21720.1hmmpanther:PTHR36053HOGENOM:HOG000070809IntAct:Q9SVS5
OMA:ECNEICYPhylomeDB:Q9SVS5PIR:T05847Proteomes:UP000006548
RefSeq:NP_193903.1STRING:3702.AT4G21720.1TAIR:AT4G21720UniGene:At.32605
UniProt:Q9SVS5
Coordinates (TAIR10) chr4:+:11542561..11544274
Molecular Weight (calculated) 15437.30 Da
IEP (calculated) 6.93
GRAVY (calculated) -0.76
Length 139 amino acids
Sequence (TAIR10)
(BLAST)
001: MIPQQWTPPC GSKCTNKYSA FTQLPWRVFC KKGCDADSDS WEDCVGDCSE ICYKDPVLKD RPWTAVIDRS PGDAKYSEEC FHACVAGCGY KFDVEAEIVN
101: KVKPKRPPPP PPKPQPPPPP PRSQKPMQPP TEDVLATSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)