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AT2G45060.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Uncharacterised conserved protein UCP022280
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Uncharacterised conserved protein UCP022280; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP022280 (TAIR:AT4G26410.1); Has 86 Blast hits to 86 proteins in 26 species: Archae - 0; Bacteria - 7; Metazoa - 5; Fungi - 2; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IS7YeggNOG:ENOG410YNTDEMBL:AY045585EMBL:AY085438
EMBL:AY143908EMBL:CP002685EnsemblPlants:AT2G45060EnsemblPlants:AT2G45060.1
entrez:819113GeneID:819113GO:GO:0005739Gramene:AT2G45060.1
hmmpanther:PTHR34554hmmpanther:PTHR34554:SF1HOGENOM:HOG000005752InterPro:IPR016803
KEGG:ath:AT2G45060ncoils:CoilOMA:EQMVFGKPhylomeDB:Q94AZ5
PIRSF:PIRSF022280Proteomes:UP000006548RefSeq:NP_566034.1TAIR:AT2G45060
TMHMM:TMhelixUniGene:At.26163UniProt:Q94AZ5
Coordinates (TAIR10) chr2:-:18584674..18586688
Molecular Weight (calculated) 30339.20 Da
IEP (calculated) 9.94
GRAVY (calculated) -0.46
Length 272 amino acids
Sequence (TAIR10)
(BLAST)
001: MAALGESSSS EMDNAKSPEI QQSSPVHPPE YQKIATTTVE NAASWIDDAL RQALVYQKTI TETVDSTIDA SKARLSQIRD TSVAHTSQTI DSLRDIASEY
101: NVYEQMVFGK IKDGVNVAAS HPLISGTLAF GVGIFALKKT RRFVYYNTVR MFVSEEALLS RADLKVKELR QSMDRLKAES EKLERVATVA EEEFIRGRMK
201: LRQAGKQIRG AISSAYKIEK QAAGLKDVLK ELPTREASRF RTQISKRASE VKQERNALTK EVNKISNYGI SV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)