AT4G21120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : amino acid transporter 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
amino acid transporter 1 (AAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, cationic amino acid transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: basic amino acid transport, L-arginine import, L-glutamate import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Cationic amino acid transport permease (InterPro:IPR004755), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31468 Blast hits to 31317 proteins in 2259 species: Archae - 510; Bacteria - 25893; Metazoa - 1955; Fungi - 1722; Plants - 342; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:11270318..11273775 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64850.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.90 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.52 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 594 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASGGGDDGL RRRGCSCTKD DFLPEESFQS MGNYLKALKE TPSRFMDRIM TRSLDSDEIN EMKARSGHEM KKTLTWWDLM WFGIGAVIGS GIFVLTGLEA 101: RNHSGPAVVL SYVVSGVSAM LSVFCYTEFA VEIPVAGGSF AYLRVELGDF MAFIAAGNII LEYVVGGAAV ARSWTSYFAT LLNHKPEDFR IIVHKLGEDY 201: SHLDPIAVGV CAIICVLAVV GTKGSSRFNY IASIIHMVVI LFVIIAGFTK ADVKNYSDFT PYGVRGVFKS AAVLFFAYIG FDAVSTMAEE TKNPGRDIPI 301: GLVGSMVVTT VCYCLMAVTL CLMQPYQQID PDAPFSVAFS AVGWDWAKYI VAFGALKGMT TVLLVGAIGQ ARYMTHIARA HMMPPWLAQV NAKTGTPINA 401: TVVMLAATAL IAFFTKLKIL ADLLSVSTLF IFMFVAVALL VRRYYVTGET STRDRNKFLV FLGLILASST ATAVYWALEE EGWIGYCITV PIWFLSTVAM 501: KFLVPQARAP KIWGVPLVPW LPSASIAINI FLLGSIDTKS FVRFAIWTGI LLIYYVLFGL HATYDTAKAT LKEKQALQKA EEGGVVADNS CSAT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)