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AT1G74010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28611809 (2017): cytosol
  • PMID:22923678 (2012): plasma membrane
  • PMID:22550958 (2012): plastid
  • PMID:22318864 (2012): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:16287169 (2006): extracellular region
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Calcium-dependent phosphotriesterase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: biosynthetic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: strictosidine synthase 2 (TAIR:AT1G74020.1); Has 953 Blast hits to 943 proteins in 185 species: Archae - 1; Bacteria - 180; Metazoa - 219; Fungi - 0; Plants - 462; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G74010-MONOMEReggNOG:COG3386eggNOG:KOG1520EMBL:AC016662
EMBL:AY085703EMBL:BT000464EMBL:BT008722EMBL:CP002684
EnsemblPlants:AT1G74010EnsemblPlants:AT1G74010.1entrez:843739Gene3D:2.120.10.30
GeneID:843739GO:GO:0005829GO:GO:0005886GO:GO:0009058
GO:GO:0009505GO:GO:0016844Gramene:AT1G74010.1hmmpanther:PTHR10426
hmmpanther:PTHR10426:SF39HOGENOM:HOG000223915InterPro:IPR004141InterPro:IPR011042
InterPro:IPR018119KEGG:ath:AT1G74010KO:K01757OMA:QTIFLKN
PANTHER:PTHR10426Pfam:PF03088PhylomeDB:Q9C9C2PIR:H96767
Proteomes:UP000006548RefSeq:NP_177541.1SMR:Q9C9C2STRING:3702.AT1G74010.1
SUPFAM:SSF63829SwissPalm:Q9C9C2TAIR:AT1G74010UniGene:At.34933
UniProt:Q9C9C2
Coordinates (TAIR10) chr1:-:27832432..27834017
Molecular Weight (calculated) 34185.90 Da
IEP (calculated) 8.42
GRAVY (calculated) 0.15
Length 325 amino acids
Sequence (TAIR10)
(BLAST)
001: MASFVFVISL LLLSFSSAVF SDDASFQKLP VPDKRSGPES FAFDSTGGFY TGVSGGKILK YVPGKGYVDF AQITDSSNSA WCNGALGTAF AGKCGRPAGI
101: ALNSKTGDLY VADAPLGLHV ISPAGGLATK LADSVDGKPF KFLDGLDVDP TTGVVYFTSF SSKFGPREVL IAVGLKDASG KLFKYDPATK AVTELMEGLS
201: GAAGCAVSSD GSFVLVSEFI KSNIKKYWIK GPKAGTIEDF SSLVSNPDNI RRVGSTGNFW VASVVNKVVM PTDPRAVKLD ANGKVLQTIF LKNEFGNTLL
301: SEVNEFNGHL YIGTLTGPFA GVMKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)