AT4G16970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.1); Has 37123 Blast hits to 30477 proteins in 1124 species: Archae - 42; Bacteria - 1923; Metazoa - 14429; Fungi - 5359; Plants - 8078; Viruses - 40; Other Eukaryotes - 7252 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:9551516..9555766 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 99645.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.74 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.67 | ||||||||||||||||||||||||||||||||||||||||
| Length | 889 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSENSEPRQL ENSTAGRELI PLSPTNSDGN DDLNYHLHAF ELSRLLLSSG HPESVIDLSS KCTYFQGSPN LVKYLCSIPN SPISLAEDGF TVTLSPESPS 101: APASFACSLD LQENVVLEQF MDPRSLTLKH SRENAEQEEL ELMPLPKRSR NDGNDVNYSV IDSRPNDIRT VACGTMLGTI LALESQASVF NLSASNRGIE 201: AFVQDHQPGP QTSNASVDVN PTHRLEESKN DLPSPQEDGY YERPEIGDFQ IADNQILIEE GDDKNKKDLF PKGEIQTDSV QSDPVASLMP TENELEPVQI 301: VDDTEDLLVD DHTVDIVSTP DRELPLKPSA TEANQDKSLV QKTLDQCKLP GNSKTYSCSP EIKHTRKSKV IQKRKQNFNT VRLKDQKDQA KHNTIPDFDS 401: YTIVEEEGSG GYGIVYKATR KTDGTEFAIK CPHVGAQKYY VNNEIRMLER FGGKNCIIKH EGCLKNGDSD CIILEHLEHD RPDSLKREID VYQLQWYGYC 501: MFKALSSLHK QGVVHRDVKP GNFLFSRKTN KGYLIDFNLA MDLHQKYRRA DKSKAASGLP TASKKHHTLV KSLDAVNRGT NKPSQKTLAP NSIKKAAGKT 601: RARNDMTRWE RLNSQGAEGS GLTSAKDVTS TRNNPSGEKR REPLPCHGRK ALLDFLQETM SVPIPNHEVS SKAPTSMRKR VAALPGKAEK ELLYLTPMPL 701: CSNGRPEAGD VIEKKDGPCS GTKGFRAPEV CFRSLHQGPK IDVWSAGVTL LYLIMGRTPF TGDPEQNIKD IAQLRGSEEL WEVAKLHNRE SSFPKELYES 801: RYLKGMELRK WCELNTKRRE FLDVIPLSLL DLVDKCLTVN PRRRISAEDA LKHDFFHPVH ETLRNQMLLK QQPTVVADAV SQTLNYLQL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)