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AT4G16765.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.879
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G16770.1); Has 8336 Blast hits to 8318 proteins in 997 species: Archae - 0; Bacteria - 1160; Metazoa - 124; Fungi - 1056; Plants - 4505; Viruses - 0; Other Eukaryotes - 1491 (source: NCBI BLink).
Protein Annotations
eggNOG:COG3491eggNOG:KOG0143EMBL:BT029508EMBL:CP002687
EnsemblPlants:AT4G16765EnsemblPlants:AT4G16765.1entrez:827382entrez:827383
ExpressionAtlas:A1A6I8Gene3D:2.60.120.330GeneID:827382GO:GO:0005506
GO:GO:0016491Gramene:AT4G16765.1gramene_pathway:1.14.11.23gramene_pathway:PWY-3101
hmmpanther:PTHR10209hmmpanther:PTHR10209:SF214InterPro:IPR002283InterPro:IPR005123
InterPro:IPR027443OMA:PFYANDSPfam:PF03171Pfscan:PS51471
PRINTS:PR00682PROSITE:PS51471Proteomes:UP000006548RefSeq:NP_849544.1
SMR:A1A6I8STRING:3702.AT4G16765.1SUPFAM:SSF51197TAIR:AT4G16765
UniGene:At.10377UniProt:A1A6I8
Coordinates (TAIR10) chr4:-:9429974..9431791
Molecular Weight (calculated) 27748.40 Da
IEP (calculated) 5.14
GRAVY (calculated) -0.15
Length 247 amino acids
Sequence (TAIR10)
(BLAST)
001: MALLRRDLLG YTPLYAEKLD PSLSSIGDSK ESFYFGSLEG VLAQRYPNQW PSEGILPSWR QTMETYYKNV LSVGRKLLGL IALALDLDED FFEKVGALND
101: PTAVVRLLRY PGEVISSDVE TYGASAHSDY GMVTLLLTDG VPGLQVCRDK SKQPHIWEDV PGIKGAFIVN IGDMMERWTN GLFRSTLHRV MPVGKERYSV
201: VFFLDPNPDC NVKCLESCCS ETCPPRFPPI LAGDYIKERF RLTYATS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)