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AT4G16580.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 838 Blast hits to 828 proteins in 210 species: Archae - 0; Bacteria - 2; Metazoa - 184; Fungi - 235; Plants - 232; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G16580-MONOMEREC:3.1.3.16eggNOG:COG0631eggNOG:KOG1379
EMBL:AK117940EMBL:AL161544EMBL:BT005292EMBL:CP002687
EMBL:Z97341EnsemblPlants:AT4G16580EnsemblPlants:AT4G16580.1entrez:827359
Gene3D:3.60.40.10GeneID:827359GO:GO:0004721GO:GO:0046872
Gramene:AT4G16580.1hmmpanther:PTHR12320hmmpanther:PTHR12320:SF1HOGENOM:HOG000239282
InParanoid:Q9SUK9InterPro:IPR001932iPTMnet:Q9SUK9KEGG:ath:AT4G16580
KO:K17508OMA:PCKSMASPaxDb:Q9SUK9Pfam:PF07228
Pfam:Q9SUK9Pfscan:PS51746PhylomeDB:Q9SUK9PIR:E85184
PRIDE:Q9SUK9PRO:PR:Q9SUK9PROSITE:PS51746ProteinModelPortal:Q9SUK9
Proteomes:UP000006548RefSeq:NP_193391.3SMART:SM00331SMART:SM00332
STRING:3702.AT4G16580.1SUPFAM:SSF81606TAIR:AT4G16580UniGene:At.33067
UniGene:At.70773UniProt:Q9SUK9
Coordinates (TAIR10) chr4:-:9341152..9342555
Molecular Weight (calculated) 50299.50 Da
IEP (calculated) 8.21
GRAVY (calculated) -0.25
Length 467 amino acids
Sequence (TAIR10)
(BLAST)
001: MLPVRESLQK QVKILIGLGN LGFGGYRGLY TRFTNPNGFL EPASSDLLLI NERRNLSVIG AVSRTFSVPS VSGPAFQVCG YHIDLLLSDP CKSMASLGSK
101: SLFVDRHSAS LVSKRFTGGM VSGDGPNRGR ISMRLRGKDH NEKSTICAYF AYRGAKRWIY LNQQRRGMGF RGLHSSLSNR LSAGNAPDVS LDNSVTDEQV
201: RDSSDSVAAK LCTKPLKLVS GSCYLPHPDK EATGGEDAHF ICAEEQALGV ADGVGGWAEL GIDAGYYSRE LMSNSVNAIQ DEPKGSIDPA RVLEKAHTCT
301: KSQGSSTACI IALTNQGLHA INLGDSGFMV VREGHTVFRS PVQQHDFNFT YQLESGRNGD LPSSGQVFTV AVAPGDVIIA GTDGLFDNLY NNEITAIVVH
401: AVRANIDPQV TAQKIAALAR QRAQDKNRQT PFSTAAQDAG FRYYGGKLDD ITVVVSYVAA SKEEGKH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)