AT4G13550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : triglyceride lipases;triglyceride lipases | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:7871251..7876160 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 79384.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.83 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||||||
| Length | 715 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVRLLKAKPN GEWCHCHIGR TKEPKWNEDF VFNIKLPPAK KIEIAAWDAN LVTPHKRMGN SEINLESVCD GNLHKVLVEL DGIGGGGKVQ LEIKYKGFGE 101: VEEEKKWWRF PFVSEFLQRN EIKSVLKNFV DSEAVESVLK NLVDSEAVPA RQFVEYAFGQ LKSLNDAPLK NTELLNNTAE DSEGASSEDS SDQHRSTNLS 201: SSGKLSKDKD GDGDGHGNEL EDDNESGSIQ SESNFWDNIP DIVGQNIVQK LGLPSPEKLK WNGTELLENF GLQSRKTAEA GYIESGLATA DTREADDEKE 301: DGQVAINASK SSLADMKNAT QELLKQADNV FGALMVLKAV VPHLSKDSVG SEKVIEKNGS SSVTDDVSGS SKTEKISGLV NVDGADEKNA EEMKTLFSSA 401: ESAMEAWAML ATALGHPSFI KSEFEKLCFL ENDITDTQVA IWRDARRKRV VIAFRGTEQT KWKDLQTDLM LVPAGLNPER IGGDFKQEVQ VHSGFLSAYD 501: SVRIRIISLL KMTIGYIDDV TEREDKWHVY VTGHSLGGAL ATLLALELSS SQLAKRGAIT VTMYNFGSPR VGNKQFAEIY NQKVKDSWRV VNHRDIIPTV 601: PRLMGYCHVA HPVYLSAGDV EDIEFQKDGY HAEVIGEATP DILVSRFMKG EKELVEKILQ TEIKIFNALR DGSALMQHME DFYYITLLES VKLYYKTVED 701: PKGVESTTIQ SVGES |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)