AT4G09060.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
|||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; LOCATED IN: membrane; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1); Has 8168 Blast hits to 6036 proteins in 601 species: Archae - 151; Bacteria - 570; Metazoa - 4684; Fungi - 544; Plants - 345; Viruses - 91; Other Eukaryotes - 1783 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:-:5797781..5800253 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 39266.50 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.40 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.94 | ||||||||||||||||||||||||
| Length | 341 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRSERIDSDE AETKSRTNLS QEVEEYIKDT IDHSLGLPIS MESLQKKLYT AEESQRRLRE QYQGLISRLK EKDHVIDRVR SEASMNAQAL KKFVEENQKL 101: ASECGNLLSQ CKKLEKECLL YHQDRDALME FGNESDERAR EAEARVRELE DEIGRMSEEM QRFKRQIGDG EVENCTTPLE EDLLDSVLGS LISKDETIMG 201: RLFLEANIHD QSCQALLSKW DHLKPSTQKV LSLVSKAKKF EKEKECIIMN LAKAEQEVEL VSTLNRKLDK ENRKLLRQQQ SPLCSADKNR NSASAKSNKR 301: KSPKTMSSPV EKRLEFSSPE ISRKPLSPVW NNSPDSKMNN N |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)