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AT4G00720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : shaggy-like protein kinase 32
Curator
Summary (TAIR10)
Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway.
Computational
Description (TAIR10)
shaggy-like protein kinase 32 (SK32); FUNCTIONS IN: kinase activity; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 13 (TAIR:AT5G14640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG0658EMBL:AK226199EnsemblPlants:AT4G00720
EnsemblPlants:AT4G00720.1entrez:828023ExpressionAtlas:Q0WWY4GeneID:828023
GO:GO:0004672GO:GO:0005524Gramene:AT4G00720.1InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441iPTMnet:Q0WWY4
KEGG:ath:AT4G00720KO:K00924OMA:ANVCHRDPaxDb:Q0WWY4
Pfam:PF00069Pfam:Q96287Pfscan:PS50011PhylomeDB:Q0WWY4
PRIDE:Q0WWY4PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q0WWY4RefSeq:NP_191981.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q0WWY4STRING:3702.AT4G00720.1SUPFAM:SSF56112
TAIR:AT4G00720tair10-symbols:ASKTHETAtair10-symbols:ATSK32tair10-symbols:SK32
UniGene:At.24189UniProt:Q0WWY4UniProt:Q96287
Coordinates (TAIR10) chr4:-:294116..297002
Molecular Weight (calculated) 53164.90 Da
IEP (calculated) 7.48
GRAVY (calculated) -0.38
Length 472 amino acids
Sequence (TAIR10)
(BLAST)
001: MNVMRRLKSI ASGRTSISSD PGGDYALKRA KLDQENDNLC VDPMQVDQNS SCFEMKADVL SQESVAGTSN VPAVSEKPVD DQLPDVMIEM KIRDERNANR
101: EDKDMETTVV NGSGTETGQV ITTTVGGRDG KPKQTISYMA QRVVGTGSFG VVFQAKCLET GEQVAIKKVL QDKRYKNREL QIMRLQDHPN VVRLRHSFFS
201: TTDKDELYLN LVLEYVPETV YRASKHYTKM NQHMPIIFVQ LYTYQICRAL NYLHRVVGVC HRDIKPQNLL VNPQTHQLKI CDFGSAKMLV PGEPNISYIC
301: SRYYRAPELI FGATEYTNAI DMWSGGCVMA ELLLGQPLFP GESGIDQLVE IIKILGTPTR EEIRCMNPNY TEFKFPQIKA HPWHKIFHKR MPPEAVDLVS
401: RLLQYSPNLR CTALEACAHP FFDDLRDPNV SLPNGRALPP LFNFTAQELA GASTELRQRL IPAHCQGTGS SS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)