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AT3G61610.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.994
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Galactose mutarotase-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, N-terminal protein myristoylation, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT4G23730.1); Has 2031 Blast hits to 2028 proteins in 827 species: Archae - 0; Bacteria - 1385; Metazoa - 39; Fungi - 135; Plants - 269; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-382-MONOMEReggNOG:COG0676eggNOG:KOG1594EMBL:AL132962
EMBL:CP002686EnsemblPlants:AT3G61610EnsemblPlants:AT3G61610.1entrez:825334
Gene3D:2.70.98.10GeneID:825334GO:GO:0005975GO:GO:0016853
GO:GO:0030246Gramene:AT3G61610.1hmmpanther:PTHR11122hmmpanther:PTHR11122:SF10
HOGENOM:HOG000283048InterPro:IPR008183InterPro:IPR011013InterPro:IPR014718
InterPro:IPR025532KEGG:ath:AT3G61610KO:K01792OMA:DERSWEC
Pfam:PF01263PhylomeDB:Q9M308PIR:T47953PIRSF:PIRSF016020
Proteomes:UP000006548RefSeq:NP_191720.1SMR:Q9M308STRING:3702.AT3G61610.1
SUPFAM:SSF74650TAIR:AT3G61610UniGene:At.50301UniProt:Q9M308
Coordinates (TAIR10) chr3:+:22799480..22801029
Molecular Weight (calculated) 35943.60 Da
IEP (calculated) 5.14
GRAVY (calculated) -0.43
Length 317 amino acids
Sequence (TAIR10)
(BLAST)
001: MGQYATVWDQ KEASEIIKDW NGVDQVLLRN PHGASAKISL HGGQVISWRN ELGEELLFTS NKAIFKPPKS MRGGIQICYP QFGDCGSLDQ HGFARNKIWV
101: IDENPPPLNS NESLGKSFVD LLLKPSEDDL KQWPHSFEFR LRVSLAVDGD LTLTSRIRNI NGKPFSFSFA YHTYLSVSDI SEVRIEGLET LDYLDNLSQR
201: QLLTEQGDAI TFESEMDRTY LRSPKVVAVL DHERKRTYVI GKEGLPDTVV WNPWEKKSKT MADFGDEEYK SMLCVDGAAV ERPITLKPGE EWTGRLILTA
301: VKSSFCFDQL ELQSKGF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)