AT3G17680.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Kinase interacting (KIP1-like) family protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT1G48405.1); Has 122 Blast hits to 120 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:6043138..6044267 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 35567.50 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.71 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||
| Length | 313 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKNKASMEAP QLPSLSDLEA RMQILRESGF QESQGDDDTF AQRAEWFYQG RPLLLSLCLD LYNGYVTLLG RSSHQTRLKP TTSLPNQLLQ DDDDCISDID 101: SVSEVSSEVE STLSFQQMKD PTAVSEKVDE LVSQLVTASL DKEILKHELL HKDQQFHEAS KTIELLKKFV MLLEMEKEVA VEENANLGYK LTSLLEENRE 201: LATEALFMKN EAVGLARCVL KMRDDHFHKV CILQNRIYSL QASRNSEPVS DKVSYGCFGL DKHKTKKKKE NKTEEKKPGF KWLKKLNTIN LFTKCSLNPS 301: AAAPSCCTFD LPY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)