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AT3G58160.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
golgi 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Class XI myosin gene expressed in flowers from 4-6 week old plants and leaves from 3 week old plants
Computational
Description (TAIR10)
XIJ; FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex, vacuole; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 12832 Blast hits to 9780 proteins in 894 species: Archae - 19; Bacteria - 223; Metazoa - 7630; Fungi - 1066; Plants - 790; Viruses - 83; Other Eukaryotes - 3021 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5022eggNOG:KOG0160EMBL:AL137081EMBL:CP002686
EMBL:Z34294EnsemblPlants:AT3G58160EnsemblPlants:AT3G58160.1entrez:824985
Gene3D:3.40.50.300GeneID:824985Genevisible:Q9M2K0GO:GO:0003774
GO:GO:0005524GO:GO:0005773GO:GO:0016459GO:GO:0030048
Gramene:AT3G58160.1hmmpanther:PTHR13140hmmpanther:PTHR13140:SF471HOGENOM:HOG000029608
InParanoid:Q9M2K0InterPro:IPR000048InterPro:IPR001609InterPro:IPR004009
InterPro:IPR027417iPTMnet:Q9M2K0KEGG:ath:AT3G58160ncoils:Coil
OMA:GHERKTKPaxDb:Q9M2K0Pfam:PF00063Pfam:PF00612
Pfam:PF02736Pfam:Q9M2K0Pfscan:PS50096Pfscan:PS51456
PhylomeDB:Q9M2K0PIR:S47105PIR:T45976PRIDE:Q9M2K0
PRINTS:PR00193PRO:PR:Q9M2K0PROSITE:PS50096PROSITE:PS51456
ProteinModelPortal:Q9M2K0Proteomes:UP000006548RefSeq:NP_191375.1SMART:SM00015
SMART:SM00242SMR:Q9M2K0STRING:3702.AT3G58160.1SUPFAM:SSF52540
TAIR:AT3G58160tair10-symbols:ATMYOS3tair10-symbols:ATXIJtair10-symbols:MYA3
tair10-symbols:XI-16tair10-symbols:XIJUniGene:At.28666UniProt:Q9M2K0
Coordinates (TAIR10) chr3:+:21534797..21541877
Molecular Weight (calculated) 141421.00 Da
IEP (calculated) 5.95
GRAVY (calculated) -0.62
Length 1242 amino acids
Sequence (TAIR10)
(BLAST)
0001: MAENIMVDSH VWVEDPERAW IDGVVLNIKG EEAEIKTNDG RDVIANLSRL YPKDTEAPSE GVEDMTRLSY LHEPAVLDNL ATRYELNEIY TYTGNILIAV
0101: NPFQGLPHLY DAEVMEKYKE AYFKELNPHV FAIGGIAYRE MINEGRNKCI LVSGESGSGK TETTKMLMRY LAYFGGHTAV EGRTVENQVL ESNPVLEAFG
0201: NAKTVKNNNS SRFGKFVEIQ FDDVGRISGA AIRTYLLERS RVCQVSDPER NYHCFYLLCA APPEDVERFK LGDPKSFRYL NQSSCYKLDG VNDAEEYLAT
0301: RRAMDVVGIS EKEQDAIFRV VASILHLGNI EFSKGEDADS SSVKDEQSMF HLQMTSELLM CDPHSLEDAL CKRMMVTPEE VIKRSLDPLG AAVSRDGLAK
0401: TIYSRLFDWL VNKINISIGQ DSHSRRLIGV LDIYGFESFK TNSFEQFCIN YTNEKLQQHF NQHVFKMEQG EYQKEEIDWS YVEFVDNKDV VDLIEKKPGG
0501: IIALLDEACM LPKSTPETFS EKLYHTFKDH KRFMKPKLTR SDFTLVHYAG DVQYQSDQFL DKNKDYVVAE HQDLLNASKC SFVSGLFPPL PKESSKSKFS
0601: SIGARFKLQL QQLMETLNST EPHYIRCVKP NNLLQPTVFD NANVLHQLRS GGVLEAIRVK CAGYPTNRTF IEFLNRFLIL APEILKGEYE AEVACKWILE
0701: KKGLTGYQIG KSKVFLRAGQ MAELDAHRTR VLGESARMIQ GQVRTRLTRE RFVLMRRASV NIQANWRGNI ARKISKEMRR EEAAIKIQKN LRRQIAKKDY
0801: GKTKSSALTL QSGVRTMAAR HEFRYKLTTR AATVIQAYWR GYSAISDYKK LKRVSLLCKS NLRGRIARKQ LGQSKQADRK EETEKERKVE LSNRAEEAVD
0901: MSFVLHSEQS DDAESGHGRK AKLSIESEDG LDKSSVLHSE QSDDEELGHE RKTKLSIESE DGHSDQSDDE EIEHERKTKH CIQAEDGIEK SYVMHSDQSD
1001: DEEIGHKRKT KHSIQAEDGI EKSFVVHSDQ SDDEEIGHER KTKHAIQVED GIQKSFVTCS EKPYNTFSVV SQITSPIRDT EIESLTAEVE MLKALLQVEK
1101: QRADISERKC AEARELGERR RKRLEETERR VYQLQDSLNR LLYSMSDQFS QLKSILRSPS MSASTMASAP VVRDDLADSS ENSEASSSDS DFTFPAPSPS
1201: SDNFSTFNPN QLQVIVQDLS TTEAKGTESY DSDKEGGFED YF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)