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AT3G59410.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GCN2; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, translation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Anticodon-binding (InterPro:IPR004154), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G02760.1); Has 102900 Blast hits to 101457 proteins in 4494 species: Archae - 105; Bacteria - 12314; Metazoa - 36099; Fungi - 10698; Plants - 26119; Viruses - 326; Other Eukaryotes - 17239 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G59410-MONOMERBioCyc:ARA:GQT-1223-MONOMERDNASU:825110EC:2.7.11.1
eggNOG:COG0124eggNOG:KOG1035EMBL:AJ459823EMBL:AL356014
EMBL:CP002686EnsemblPlants:AT3G59410EnsemblPlants:AT3G59410.1entrez:825110
ExpressionAtlas:Q9LX30Gene3D:3.10.110.10Gene3D:3.40.50.800GeneID:825110
Genevisible:Q9LX30GO:GO:0000049GO:GO:0004674GO:GO:0005524
GO:GO:0005737GO:GO:0006412GO:GO:0006417GO:GO:0010942
GO:GO:0034198GO:GO:0070301GO:GO:0072755GO:GO:1990451
hmmpanther:PTHR11042hmmpanther:PTHR11042:SF96HOGENOM:HOG000083904InParanoid:Q9LX30
InterPro:IPR000719InterPro:IPR004154InterPro:IPR006575InterPro:IPR008266
InterPro:IPR011009InterPro:IPR016135InterPro:IPR017441InterPro:IPR024435
iPTMnet:Q9LX30KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1PaxDb:Q9LX30
Pfam:PF00069Pfam:PF05773Pfam:PF12745Pfam:PF13393
Pfam:Q9LX30Pfscan:PS50011Pfscan:PS50908PhylomeDB:Q9LX30
PIR:T49009PRIDE:Q9LX30PRO:PR:Q9LX30PROSITE:PS00107
PROSITE:PS00109PROSITE:PS50011PROSITE:PS50908ProteinModelPortal:Q9LX30
Proteomes:UP000006548RefSeq:NP_191500.2scanprosite:PS00107scanprosite:PS00109
SMART:SM00591SMR:Q9LX30STRING:3702.AT3G59410.2SUPFAM:SSF52954
SUPFAM:SSF54495SUPFAM:SSF55681SUPFAM:SSF56112TAIR:AT3G59410
tair10-symbols:GCN2UniGene:At.34633UniProt:Q9LX30
Coordinates (TAIR10) chr3:+:21950575..21959151
Molecular Weight (calculated) 140329.00 Da
IEP (calculated) 5.38
GRAVY (calculated) -0.40
Length 1241 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGRSSSKKKK KRGGSGRRGQ LKDHGSNADE DNELLSEEIT ALSAIFQEDC KVVSDSRSPP QIAIKLRPYS KDMGYEDTDI SAMLIVRCLP GYPYKCPKLQ
0101: ITPEQGLTTA DAEKLLSLLE DQANSNAREG RVMIFNLVEA AQEFLSEIIP ESHDEESVPC LTAHRSTQFI EQPMLSNIAK SCSGGPFVYG FIDLFSGLED
0201: ARNWSLTPDE NRGIVSSVQS HPLDTSRILH QKPDKNLKRF EDHAKEEVAL PAPIAKLNTV QEENVDDTSI SSFDSSKSTD DVESGLFQNE KKESNLQDDT
0301: AEDDSTNSES ESLGSWSSDS LAQDQVPQIS KKDLLMVHLL RVACTSRGPL ADALPQITDE LHELGILSEE VLDLASKSSP DFNRTFEHAF NQNMASTSVP
0401: QFWEPPSDSC EPNASLPSSR YLNDFEELKP LGQGGFGHVV LCKNKLDGRQ YAVKKIRLKD KEIPVNSRIV REVATLSRLQ HQHVVRYYQA WFETGVVDPF
0501: AGANWGSKTA GSSMFSYSGA VSTEIPEQDN NLESTYLYIQ MEYCPRTLRQ VFESYNHFDK DFAWHLIRQI VEGLAHIHGQ GIIHRDFTPN NIFFDARNDI
0601: KIGDFGLAKF LKLEQLDQDG GFSTDVAGSG VDSTGQAGTY FYTAPEIEQD WPKIDEKADM YSLGVVFFEL WHPFGTAMER HVILTNLKLK GELPLKWVNE
0701: FPEQASLLRR LMSPSPSDRP SATELLKHAF PPRMESELLD NILRIMQTSE DSSVYDRVVS VIFDEEVLEM KSHQSSRSRL CADDSYIQYT EINTELRDYV
0801: VEITKEVFRQ HCAKHLEVIP MRLLSDCPQF SRKTVKLLTN GGDMLELCYE LRLPFVHWIS VNQKSSFKRY EISHVYRRAI GHSPPNPCLQ ADFDIVGGTL
0901: SLTEAEVLKV IVDITTHIFH RGSCDIHLNH GDLLDAIWSW AGIKAEHRRK VAELLSMMGS LRPQSSERKL KWVFIRRQLL QELKLPEAVV NRLQTVASRF
1001: CGDADQALPR LRGALRADRP TRKALDELSN LLTYLRVWRI EEHVHIDVLM PPTESYHRNL FFQVFLTKEN SSGTSNDGVL LAVGGRYDWL VQEVCDREHK
1101: MNLPGAVGVS LALETIFQHL PMDLRPIRNE VSTSVLVCSR GGGGLLVQRM ELVAELWEKS IKAEFVPTPD PSLTEQYEYA NEHEIKCLVI ITESGVAQNQ
1201: IEFVKVRHLE LKKEKVVGRE ELVKFLLDAM AVQFRNPSVW S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)