suba logo
AT3G51850.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30447334 (2019): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:20843791 (2010): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15308754 (2004): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : calcium-dependent protein kinase 13
Curator
Summary (TAIR10)
member of Calcium Dependent Protein Kinase
Computational
Description (TAIR10)
calcium-dependent protein kinase 13 (CPK13); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 30 (TAIR:AT1G74740.1); Has 124889 Blast hits to 118841 proteins in 3848 species: Archae - 180; Bacteria - 14009; Metazoa - 46910; Fungi - 16716; Plants - 24454; Viruses - 407; Other Eukaryotes - 22213 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G51850-MONOMERBioGrid:9666EC:2.7.11.1eggNOG:ENOG410XRMJ
eggNOG:KOG0032EMBL:AF049236EMBL:AK220740EMBL:AY062539
EMBL:BT003367EMBL:CP002686EMBL:U54615EnsemblPlants:AT3G51850
EnsemblPlants:AT3G51850.1entrez:824348Gene3D:1.10.238.10GeneID:824348
Genevisible:Q8W4I7GO:GO:0004674GO:GO:0004683GO:GO:0005509
GO:GO:0005516GO:GO:0005524GO:GO:0005737GO:GO:0005886
GO:GO:0009738GO:GO:0009931GO:GO:0018105GO:GO:0035556
GO:GO:0046777Gramene:AT3G51850.1hmmpanther:PTHR24349hmmpanther:PTHR24349:SF145
HOGENOM:HOG000233030InParanoid:Q8W4I7InterPro:IPR000719InterPro:IPR002048
InterPro:IPR008271InterPro:IPR011009InterPro:IPR011992InterPro:IPR017441
InterPro:IPR018247iPTMnet:Q8W4I7KEGG:ath:AT3G51850KO:K13412
ncoils:CoilOMA:IMEVVKDPaxDb:Q8W4I7Pfam:PF00069
Pfam:PF13499Pfam:Q8W4I7Pfscan:PS50011Pfscan:PS50222
PhylomeDB:Q8W4I7PIR:T51156PRIDE:Q8W4I7PRO:PR:Q8W4I7
PROSITE:PS00018PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS50222ProteinModelPortal:Q8W4I7Proteomes:UP000006548RefSeq:NP_190753.2
scanprosite:PS00018scanprosite:PS00107scanprosite:PS00108SMART:SM00054
SMART:SM00220SMR:Q8W4I7STRING:3702.AT3G51850.1SUPFAM:SSF47473
SUPFAM:SSF56112SwissPalm:Q8W4I7TAIR:AT3G51850tair10-symbols:CPK13
UniGene:At.27306UniGene:At.69291UniProt:Q8W4I7
Coordinates (TAIR10) chr3:+:19232667..19235526
Molecular Weight (calculated) 59379.10 Da
IEP (calculated) 6.65
GRAVY (calculated) -0.40
Length 528 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNCCRSPAA VAREDVKSNY SGHDHARKDA AGGKKSAPIR VLSDVPKENI EDRYLLDREL GRGEFGVTYL CIERSSRDLL ACKSISKRKL RTAVDIEDVK
101: REVAIMKHLP KSSSIVTLKE ACEDDNAVHL VMELCEGGEL FDRIVARGHY TERAAAGVTK TIVEVVQLCH KHGVIHRDLK PENFLFANKK ENSPLKAIDF
201: GLSIFFKPGE KFSEIVGSPY YMAPEVLKRN YGPEIDIWSA GVILYILLCG VPPFWAESEQ GVAQAILRGV IDFKREPWPN ISETAKNLVR QMLEPDPKRR
301: LTAKQVLEHP WIQNAKKAPN VPLGDVVKSR LKQFSVMNRF KRKALRVIAE FLSTEEVEDI KVMFNKMDTD NDGIVSIEEL KAGLRDFSTQ LAESEVQMLI
401: EAVDTKGKGT LDYGEFVAVS LHLQKVANDE HLRKAFSYFD KDGNGYILPQ ELCDALKEDG GDDCVDVAND IFQEVDTDKD GRISYEEFAA MMKTGTDWRK
501: ASRHYSRGRF NSLSIKLMKD GSLNLGNE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)