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AT3G10670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30135097 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : non-intrinsic ABC protein 7
Curator
Summary (TAIR10)
Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged Fe–S clusters. Expressed in embryos and meristems.
Computational
Description (TAIR10)
non-intrinsic ABC protein 7 (NAP7); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: iron-sulfur cluster assembly, thylakoid membrane organization, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase SufC, SUF system FeS cluster assembly (InterPro:IPR010230), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 256475 Blast hits to 243565 proteins in 3618 species: Archae - 5159; Bacteria - 209774; Metazoa - 3736; Fungi - 3348; Plants - 2780; Viruses - 4; Other Eukaryotes - 31674 (source: NCBI BLink).
Protein Annotations
BioGrid:5570eggNOG:COG0396eggNOG:ENOG410IE83EMBL:AC011560
EMBL:AC011708EMBL:AC013428EMBL:AY035125EMBL:AY085010
EMBL:AY113917EMBL:BK005580EMBL:CP002686EnsemblPlants:AT3G10670
EnsemblPlants:AT3G10670.1entrez:820236Gene3D:3.40.50.300GeneID:820236
Genevisible:Q9CAF5GO:GO:0005215GO:GO:0005524GO:GO:0009507
GO:GO:0009570GO:GO:0009793GO:GO:0010027GO:GO:0042626
GO:GO:0055085Gramene:AT3G10670.1hmmpanther:PTHR24220hmmpanther:PTHR24220:SF85
InParanoid:Q9CAF5IntAct:Q9CAF5InterPro:IPR003439InterPro:IPR003593
InterPro:IPR010230InterPro:IPR017871InterPro:IPR027417KEGG:ath:AT3G10670
KO:K09013OMA:MAMLEPKPaxDb:Q9CAF5Pfam:PF00005
Pfam:Q9CAF5Pfscan:PS50893PhylomeDB:Q9CAF5PRIDE:Q9CAF5
PRO:PR:Q9CAF5PROSITE:PS00211PROSITE:PS50893ProteinModelPortal:Q9CAF5
Proteomes:UP000006548RefSeq:NP_187678.1scanprosite:PS00211SMART:SM00382
SMR:Q9CAF5STRING:3702.AT3G10670.1SUPFAM:SSF52540TAIR:AT3G10670
tair10-symbols:ATNAP7tair10-symbols:NAP7TIGRfam:TIGR01978TIGRFAMs:TIGR01978
UniGene:At.21722UniProt:Q9CAF5
Coordinates (TAIR10) chr3:-:3335325..3337304
Molecular Weight (calculated) 36933.70 Da
IEP (calculated) 7.17
GRAVY (calculated) -0.08
Length 338 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGVNLQLRH AYSIAQFVPT VSSPPPLPTQ RVRLGTSPSR VLLCNLRANS AAAPILRTTR RSVIVSASSV SSAVDSDSLV EDRDDVGRIP LLEVRDLRAV
101: IAESRQEILK GVNLVVYEGE VHAVMGKNGS GKSTFSKVLV GHPDYEVTGG SIVFKGQNLL DMEPEDRSLA GLFMSFQSPV EIPGVSNMDF LNMAFNARKR
201: KLGQPELDPI QFYSHLVSKL EVVNMKTDFL NRNVNEGFSG GERKRNEILQ LAVLGAELAI LDEIDSGLDV DALQDVAKAV NGLLTPKNSV LMITHYQRLL
301: DYIKPTLIHI MENGRIIKTG DNSLAKLLEK EGYKAISG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)