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AT3G51000.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G51000-MONOMEReggNOG:ENOG410INNCeggNOG:ENOG410XVV6EMBL:AF372961
EMBL:AL132980EMBL:AY074835EMBL:CP002686EnsemblPlants:AT3G51000
EnsemblPlants:AT3G51000.1entrez:824264ESTHER:arath-At3g51000Gene3D:3.40.50.1820
GeneID:824264GO:GO:0005829GO:GO:0016787Gramene:AT3G51000.1
hmmpanther:PTHR10992hmmpanther:PTHR10992:SF804HOGENOM:HOG000028073IntAct:Q9SD45
InterPro:IPR000073InterPro:IPR000639InterPro:IPR029058KEGG:ath:AT3G51000
merops:S33.971OMA:STIPDWIPfam:PF00561PhylomeDB:Q9SD45
PIR:T45731PRINTS:PR00412Proteomes:UP000006548Reactome:R-ATH-2142670
RefSeq:NP_190669.1SMR:Q9SD45STRING:3702.AT3G51000.1SUPFAM:SSF53474
TAIR:AT3G51000UniGene:At.849UniProt:Q9SD45
Coordinates (TAIR10) chr3:-:18945258..18946499
Molecular Weight (calculated) 36703.80 Da
IEP (calculated) 5.38
GRAVY (calculated) -0.22
Length 323 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)