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AT2G26740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27122571 (2016): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : soluble epoxide hydrolase
Curator
Summary (TAIR10)
Encodes a soluble epoxide hydrolase whose expression is induced by auxin and water stress.
Computational
Description (TAIR10)
soluble epoxide hydrolase (SEH); CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G26750.1); Has 16813 Blast hits to 16796 proteins in 1664 species: Archae - 95; Bacteria - 12002; Metazoa - 658; Fungi - 513; Plants - 624; Viruses - 3; Other Eukaryotes - 2918 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G26740-MONOMEREC:3.3.2.9eggNOG:ENOG410INMZeggNOG:ENOG410XP73
EMBL:AC003105EMBL:AF327422EMBL:AF339711EMBL:AF419592
EMBL:CP002685EMBL:D16628EnsemblPlants:AT2G26740EnsemblPlants:AT2G26740.1
entrez:817215ESTHER:arath-At2g26740Gene3D:3.40.50.1820GeneID:817215
GO:GO:0004301GO:GO:0005829GO:GO:0009414GO:GO:0009733
GO:GO:0033961Gramene:AT2G26740.1hmmpanther:PTHR10992hmmpanther:PTHR10992:SF873
HOGENOM:HOG000028073IntAct:Q42566InterPro:IPR000073InterPro:IPR000639
InterPro:IPR029058KEGG:ath:AT2G26740merops:S33.971OMA:DRMRAFY
Pfam:PF00561PhylomeDB:Q42566PIR:C84664PRINTS:PR00111
PRINTS:PR00412Proteomes:UP000006548Reactome:R-ATH-2142670RefSeq:NP_180242.1
SMR:Q42566STRING:3702.AT2G26740.1SUPFAM:SSF53474TAIR:AT2G26740
tair10-symbols:ATSEHtair10-symbols:SEHUniGene:At.23368UniProt:Q42566
Coordinates (TAIR10) chr2:-:11393148..11394257
Molecular Weight (calculated) 36425.70 Da
IEP (calculated) 5.11
GRAVY (calculated) -0.12
Length 321 amino acids
Sequence (TAIR10)
(BLAST)
001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)