AT2G32520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, transferase activity, transferring acyl groups other than amino-acyl groups; INVOLVED IN: response to zinc ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase, active site (InterPro:IPR020610), Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G35420.2); Has 3505 Blast hits to 3505 proteins in 948 species: Archae - 38; Bacteria - 2818; Metazoa - 67; Fungi - 17; Plants - 98; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:13805823..13807442 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 25922.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.13 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||||||
| Length | 239 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADSAFRKIQ IQRDDTTFDA YVVGKDDAPG IVVIQEWWGV DFEIKNHAIK ISQLEPGFKA LIPDLYRGKV GLDTAEAQHL MDGLDWPGAI KDIRASVNWL 101: KSNGSKKVGV TGMCMGGALA IASSVLVPEV DAVVGFYGTP SSELADPAQA KAPIQAHFGE LDNFVGFSDV TAAKNLEEKL KASGVAHEVH IYPGNGHAFL 201: NRSPEGVSRR KSMGLSDEDE AAVELAWSRF TSWMKQYLA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)