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AT4G30550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Class I glutamine amidotransferase-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity, acyltransferase activity; INVOLVED IN: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homoserine O-succinyltransferase (InterPro:IPR005697), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT2G23970.1); Has 7193 Blast hits to 7193 proteins in 1745 species: Archae - 322; Bacteria - 3933; Metazoa - 5; Fungi - 197; Plants - 101; Viruses - 0; Other Eukaryotes - 2635 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2803-MONOMEREC:3.4.19.-eggNOG:COG0518eggNOG:KOG3179
EMBL:AL161577EMBL:AY064159EMBL:AY086910EMBL:AY143831
EMBL:CP002687EnsemblPlants:AT4G30550EnsemblPlants:AT4G30550.1entrez:829178
Gene3D:3.40.50.880GeneID:829178GO:GO:0005829GO:GO:0008233
GO:GO:0019760Gramene:AT4G30550.1hmmpanther:PTHR11922hmmpanther:PTHR11922:SF42
InterPro:IPR017926InterPro:IPR029062KEGG:ath:AT4G30550MEROPS:C26.A05
OMA:SEVCNVEPaxDb:Q9M0A5Pfam:PF00117Pfscan:PS51273
PhylomeDB:Q9M0A5PIR:D85357PROSITE:PS51273ProteinModelPortal:Q9M0A5
Proteomes:UP000006548RefSeq:NP_194784.1SMR:Q9M0A5STRING:3702.AT4G30550.1
SUPFAM:SSF52317TAIR:AT4G30550UniGene:At.27062UniGene:At.54558
UniProt:Q9M0A5
Coordinates (TAIR10) chr4:+:14925618..14926713
Molecular Weight (calculated) 28226.10 Da
IEP (calculated) 5.22
GRAVY (calculated) -0.17
Length 249 amino acids
Sequence (TAIR10)
(BLAST)
001: MVVIEQKKRF ALFLATCDSE FVKKTYGGYF NVFVSTFGEE GEQWDLFRVI DGQFPDENDL DKYDGFVISG SPHDAFGDAD WIVKLCEVCQ KLDHMKKKVL
101: GICFGHQIIT RVKGGKIGRA LKGADMGLRS ITIAKDNEKL RGYFGDVEVP ASLAIIKCHQ DEVLELPESA TLLASSEVCN VEMFSIGDHF FCIQGHPEYN
201: KEILFEIVDR VLNMKLMEQE FADKAKSTME TAQPDRILWQ KLCKNFLKG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)