AT3G49050.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.520 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G00500.2); Has 551 Blast hits to 551 proteins in 136 species: Archae - 0; Bacteria - 6; Metazoa - 153; Fungi - 88; Plants - 205; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:18181498..18183613 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54815.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.23 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||||||||||
| Length | 477 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSILCGCCPL LECVYCLGCA RWGYKRCLYT AGHDSEDWGL ATTDEFEPVP RFCRYILAVY EDDIRNPLWE PPEGYGINPD WLLLKKTYED TQGRAPAYIL 101: YLDHVHQDIV VAIRGLNLAK ESDYAMLLDN KLGERKFDGG YVHNGLVKSA GYVLDEECKV LKELVKKYPS YTLTFAGHSL GSGVATMLAL LVVRHPERLG 201: NIDRKRVRCF AIAPARCMSL NLAVRYADVI NSVILQDDFL PRTATPLEDI FKSVFCLPCL LCIRCMKDTC VPEQKMLKDP RRLYAPGRMY HIVERKPCRL 301: GRYPPVVKTA VPVDGRFEHI VLSCNATSDH AIIWIEREAQ RALNLMMENE KKMEIPEKQR MERQESLARE HNLEYRAALR RAVTLDVPHA ESMAYEYGTF 401: DKTQEDETEE EEVETEEEEE DTDSIAPMVG ESSSSSSVKP TYRIRRNRRV SWDELIEHLF ERDESGNLTF EKSDLPQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)