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AT3G49050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.520
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity, calmodulin binding; INVOLVED IN: lipid catabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro:IPR005592); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G00500.2); Has 551 Blast hits to 551 proteins in 136 species: Archae - 0; Bacteria - 6; Metazoa - 153; Fungi - 88; Plants - 205; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IU9MeggNOG:ENOG4110PJ8EMBL:AK228543EMBL:AL132967
EMBL:BT006185EMBL:BT008521EMBL:CP002686EnsemblPlants:AT3G49050
EnsemblPlants:AT3G49050.1entrez:824066ESTHER:arath-At3g49050Gene3D:3.40.50.1820
GeneID:824066GO:GO:0016042GO:GO:0016787Gramene:AT3G49050.1
hmmpanther:PTHR21493hmmpanther:PTHR21493:SF112HOGENOM:HOG000240361InterPro:IPR002921
InterPro:IPR005592InterPro:IPR029058KEGG:ath:AT3G49050ncoils:Coil
OMA:LLCIRCMPfam:PF01764Pfam:PF03893PhylomeDB:Q9SMU2
PIR:T46125Proteomes:UP000006548RefSeq:NP_190474.1SUPFAM:SSF53474
TAIR:AT3G49050UniGene:At.35653UniProt:Q9SMU2
Coordinates (TAIR10) chr3:+:18181498..18183613
Molecular Weight (calculated) 54815.70 Da
IEP (calculated) 5.23
GRAVY (calculated) -0.40
Length 477 amino acids
Sequence (TAIR10)
(BLAST)
001: MSILCGCCPL LECVYCLGCA RWGYKRCLYT AGHDSEDWGL ATTDEFEPVP RFCRYILAVY EDDIRNPLWE PPEGYGINPD WLLLKKTYED TQGRAPAYIL
101: YLDHVHQDIV VAIRGLNLAK ESDYAMLLDN KLGERKFDGG YVHNGLVKSA GYVLDEECKV LKELVKKYPS YTLTFAGHSL GSGVATMLAL LVVRHPERLG
201: NIDRKRVRCF AIAPARCMSL NLAVRYADVI NSVILQDDFL PRTATPLEDI FKSVFCLPCL LCIRCMKDTC VPEQKMLKDP RRLYAPGRMY HIVERKPCRL
301: GRYPPVVKTA VPVDGRFEHI VLSCNATSDH AIIWIEREAQ RALNLMMENE KKMEIPEKQR MERQESLARE HNLEYRAALR RAVTLDVPHA ESMAYEYGTF
401: DKTQEDETEE EEVETEEEEE DTDSIAPMVG ESSSSSSVKP TYRIRRNRRV SWDELIEHLF ERDESGNLTF EKSDLPQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)