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AT3G29200.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : chorismate mutase 1
Curator
Summary (TAIR10)
L-ascorbate peroxidase
Computational
Description (TAIR10)
chorismate mutase 1 (CM1); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 3 (TAIR:AT1G69370.1); Has 278 Blast hits to 278 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 142; Plants - 118; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G29200-MONOMERBioCyc:MetaCyc:AT3G29200-MONOMEREC:5.4.99.5eggNOG:COG1605
eggNOG:KOG0795EMBL:AB026657EMBL:AJ242647EMBL:BT024732
EMBL:CP002686EMBL:Z26519EnsemblPlants:AT3G29200EnsemblPlants:AT3G29200.1
entrez:822573Gene3D:1.10.590.10GeneID:822573Genevisible:P42738
GO:GO:0004106GO:GO:0005829GO:GO:0009073GO:GO:0009507
GO:GO:0016688GO:GO:0046417GO:GO:0098869Gramene:AT3G29200.1
gramene_pathway:5.4.99.5gramene_pathway:PWY-3461gramene_pathway:PWY-3462gramene_pathway:TYRSYN
hmmpanther:PTHR21145hmmpanther:PTHR21145:SF0HOGENOM:HOG000176992InParanoid:P42738
InterPro:IPR008238InterPro:IPR020822KEGG:00400+5.4.99.5KEGG:ath:AT3G29200
KO:K01850OMA:GFEGSWLPANTHER:PTHR21145PaxDb:P42738
PDB:4PPUPDB:4PPVPDBsum:4PPUPDBsum:4PPV
Pfam:P42738Pfscan:PS51169PIR:S38958PRIDE:P42738
PRO:PR:P42738PROSITE:PS51169ProteinModelPortal:P42738Proteomes:UP000006548
RefSeq:NP_566846.1SMR:P42738STRING:3702.AT3G29200.1SUPFAM:SSF48600
TAIR:AT3G29200tair10-symbols:ATCM1tair10-symbols:CM1TIGRfam:TIGR01802
TIGRFAMs:TIGR01802UniGene:At.11UniPathway:UPA00120UniProt:P42738
Coordinates (TAIR10) chr3:-:11164582..11166258
Molecular Weight (calculated) 38240.80 Da
IEP (calculated) 5.72
GRAVY (calculated) -0.39
Length 340 amino acids
Sequence (TAIR10)
(BLAST)
001: MEASLLMRSS CCSSAIGGFF DHRRELSTST PISTLLPLPS TKSSFSVRCS LPQPSKPRSG TSSVHAVMTL AGSLTGKKRV DESESLTLEG IRNSLIRQED
101: SIIFGLLERA KYCYNADTYD PTAFDMDGFN GSLVEYMVKG TEKLHAKVGR FKSPDEHPFF PDDLPEPMLP PLQYPKVLHF AADSININKK IWNMYFRDLV
201: PRLVKKGDDG NYGSTAVCDA ICLQCLSKRI HYGKFVAEAK FQASPEAYES AIKAQDKDAL MDMLTFPTVE DAIKKRVEMK TRTYGQEVKV GMEEKEEEEE
301: EGNESHVYKI SPILVGDLYG DWIMPLTKEV QVEYLLRRLD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)