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AT3G28950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AIG2-like (avirulence induced gene) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AIG2-like (avirulence induced gene) family protein; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT3G28940.1); Has 301 Blast hits to 301 proteins in 90 species: Archae - 4; Bacteria - 63; Metazoa - 0; Fungi - 82; Plants - 103; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Protein Annotations
DNASU:822532eggNOG:ENOG410J20XeggNOG:ENOG410XV5JEMBL:AB025615
EMBL:AK227989EMBL:BT004596EMBL:CP002686EnsemblPlants:AT3G28950
EnsemblPlants:AT3G28950.1entrez:822532Gene3D:3.10.490.10GeneID:822532
Gramene:AT3G28950.1hmmpanther:PTHR31544InterPro:IPR009288InterPro:IPR013024
KEGG:ath:AT3G28950OMA:DFEEWRVPDB:2JQVPDBsum:2JQV
Pfam:PF06094PhylomeDB:Q9MBH1Proteomes:UP000006548RefSeq:NP_189537.1
SMR:Q9MBH1STRING:3702.AT3G28950.1SUPFAM:SSF110857TAIR:AT3G28950
UniGene:At.43827UniProt:Q9MBH1
Coordinates (TAIR10) chr3:-:10976359..10977370
Molecular Weight (calculated) 18619.90 Da
IEP (calculated) 4.66
GRAVY (calculated) -0.42
Length 165 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSSDPQSHN VFVYGSILEP AVAAVILDRT ADTVPAVLHG YHRYKLKGLP YPCIVSSDSG KVNGKVITGV SDAELNNFDV IEGNDYERVT VEVVRMDNSE
101: KVKVETYVWV NKDDPRMYGE WDFEEWRVVH AEKFVETFRK MLEWNKNPNG KSMEEAVGSL LSSGD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)