AT3G23600.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to salt stress; LOCATED IN: apoplast, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dienelactone hydrolase (InterPro:IPR002925); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23570.1); Has 1028 Blast hits to 1025 proteins in 239 species: Archae - 2; Bacteria - 208; Metazoa - 70; Fungi - 512; Plants - 205; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:8473833..8475655 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 25863.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.97 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||
| Length | 239 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSGPQCCENP PTLNPVSGSG HVEKLGGLDA YVSGSAESKL CVLLISDIFG FEAPNLRALA DKVAASGFYV VVPDYFGGDP YNPSNQDRPI PVWIKDHGCD 101: KGFENTKPVL ETIKNKGITA IGAAGMCWGA KVVVELSKEE LIQAAVLLHP SFVNVDDIKG GKAPIAILGA EIDQMSPPAL LKQFEEILSS KPEVNSYVKI 201: HPKVSHGWTV RYNIDEPEAV KAAEEAHKEM LDWFVTYIK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)