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AT3G26770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26760.1); Has 124722 Blast hits to 124477 proteins in 3643 species: Archae - 1005; Bacteria - 80894; Metazoa - 6366; Fungi - 6864; Plants - 2737; Viruses - 9; Other Eukaryotes - 26847 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G26770-MONOMEReggNOG:COG1028eggNOG:KOG0725EMBL:AB016889
EMBL:AY143855EMBL:CP002686EnsemblPlants:AT3G26770EnsemblPlants:AT3G26770.1
entrez:822290Gene3D:3.40.50.720GeneID:822290GO:GO:0016491
Gramene:AT3G26770.1hmmpanther:PTHR24322hmmpanther:PTHR24322:SF547InterPro:IPR002347
InterPro:IPR016040KEGG:ath:AT3G26770OMA:ATPFITEPANTHER:PTHR24322
Pfam:PF00106PhylomeDB:Q9LW34PRINTS:PR00080PRINTS:PR00081
Proteomes:UP000006548Reactome:R-ATH-2142700Reactome:R-ATH-70895RefSeq:NP_566798.1
SMR:Q9LW34STRING:3702.AT3G26770.1SUPFAM:SSF51735TAIR:AT3G26770
UniGene:At.6027UniProt:Q9LW34
Coordinates (TAIR10) chr3:+:9845494..9847079
Molecular Weight (calculated) 31785.40 Da
IEP (calculated) 7.99
GRAVY (calculated) 0.14
Length 306 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAIVLIRSI VRNFKRPATA ASAAYSTGGG GGGCTCTSKK LEGKVALITG GASGLGKATA SEFLRHGARV VIADLDAETG TKTAKELGSE AEFVRCDVTV
101: EADIAGAVEM TVERYGKLDV MYNNAGIVGP MTPASISQLD MTEFERVMRI NVFGVVSGIK HAAKFMIPAR SGCILCTSSV AGVTGGLAPH SYTISKFTTP
201: GIVKSAASEL CEHGVRINCI SPGTVATPLT LSYLQKVFPK VSEEKLRETV KGMGELKGAE CEEADVAKAA LYLASNDGKY VTGHNLVVDG GMTAFKIAGF
301: PFPSDS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)