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AT2G18360.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.985
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, hypocotyl, root, leaf; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36610.1); Has 8797 Blast hits to 8792 proteins in 1517 species: Archae - 89; Bacteria - 6094; Metazoa - 449; Fungi - 67; Plants - 445; Viruses - 0; Other Eukaryotes - 1653 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0596eggNOG:KOG1454EMBL:AC006439EMBL:AF361631
EMBL:AY113164EMBL:CP002685EnsemblPlants:AT2G18360EnsemblPlants:AT2G18360.1
entrez:816351ESTHER:arath-At2g18360Gene3D:3.40.50.1820GeneID:816351
Gramene:AT2G18360.1gramene_plant_reactome:1119450gramene_plant_reactome:6876492hmmpanther:PTHR10992
hmmpanther:PTHR10992:SF838HOGENOM:HOG000237545InterPro:IPR000073InterPro:IPR029058
KEGG:ath:AT2G18360MEROPS:S33.A15OMA:FWIPKETPfam:PF00561
PhylomeDB:Q9ASW5PIR:D84563PRINTS:PR00111Proteomes:UP000006548
RefSeq:NP_565437.1SMR:Q9ASW5STRING:3702.AT2G18360.1SUPFAM:SSF53474
SwissPalm:Q9ASW5TAIR:AT2G18360UniGene:At.28707UniProt:Q9ASW5
Coordinates (TAIR10) chr2:-:7976848..7979221
Molecular Weight (calculated) 35528.70 Da
IEP (calculated) 9.91
GRAVY (calculated) -0.05
Length 313 amino acids
Sequence (TAIR10)
(BLAST)
001: MVNFVDLQKP LLYRLMKLAG VIPYTVELEP GTKMNFWIPK ETLKKTKKSD KNFAVEPQKP TKPVLLFIHG FAAEGIVTWQ FQVGSLAKKY SVYIPDLLFF
101: GGSYSDNADR SPAFQAHCLV KSLRILGIEK FTLVGFSYGG MVAFKIAEEY PEMVQAMVVS GSILAMTDTI SESNLNQLGF KSSADLLLPT SVKGLKTLFT
201: LAVHKPMWFP KRLFKDFIEV MITNRKERAE LLEALVISNK DVTIPRFQQK IHLLWGESDQ IFNLEFAKSM KEQLGENATM ESIKKAGHLA HLERPCVYNR
301: RLKKFLASVY SEN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)