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AT1G24430.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.953
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G26040.1); Has 2376 Blast hits to 2366 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 27; Plants - 2343; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G24430-MONOMEReggNOG:ENOG410IVCGeggNOG:ENOG41113FVEMBL:AC000103
EMBL:CP002684EnsemblPlants:AT1G24430EnsemblPlants:AT1G24430.1entrez:839059
Gene3D:3.30.559.10GeneID:839059GO:GO:0016747Gramene:AT1G24430.1
hmmpanther:PTHR31623hmmpanther:PTHR31623:SF3HOGENOM:HOG000090321InterPro:IPR003480
InterPro:IPR023213KEGG:ath:AT1G24430OMA:PPKNISGPfam:PF02458
PhylomeDB:Q9FYM0Proteomes:UP000006548RefSeq:NP_173852.4SMR:Q9FYM0
TAIR:AT1G24430UniGene:At.41434UniProt:Q9FYM0
Coordinates (TAIR10) chr1:-:8658190..8659497
Molecular Weight (calculated) 49291.00 Da
IEP (calculated) 5.61
GRAVY (calculated) -0.18
Length 435 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLEITVTSQ ELVKPSPRNL NHPPCHHHLS FLDQLAPPIF MPFLFFYHNK TNLSDKERSD HIKSSLSEIL NLYYPLAGRI KNSGDVVVCN DVGVSFVEAK
101: ADCNMSQILE NPNPNELNKL HPFEFHEVSD VPLTVQLTFF ECGGLALGIG LSHKLCDALS GLIFVNSWAA FARGQTDEII TPSFDLAKMF PPCDIENLNM
201: ATGITKENIV TRRFVFLRSS VESLRERFSG NKKIRATRVE VLSVFIWSRF MASTNHDDKT GKIYTLIHPV NLRRQADPDI PDNMFGNIMR FSVTVPMMII
301: NENDEEKASL VDQMREEIRK IDAVYVKKLQ EDNRGHLEFL NKQASGFVNG EIVSFSFTSL CKFPVYEADF GWGKPLWVAS ARMSYKNLVA FIDTKEGDGI
401: EAWINLDQND MSRFEADEEL LRYVSSNPSV MVSVS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)