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AT3G47790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.983
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ABC2 homolog 7
Curator
Summary (TAIR10)
member of ATH subfamily
Computational
Description (TAIR10)
ABC2 homolog 7 (ATH7); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: N-terminal protein myristoylation; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 2 (TAIR:AT3G47740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G47790-MONOMEReggNOG:COG1131eggNOG:KOG0059EMBL:AL049746
EMBL:AY099665EMBL:CP002686EnsemblPlants:AT3G47790EnsemblPlants:AT3G47790.1
entrez:823933Gene3D:3.40.50.300GeneID:823933GO:GO:0005215
GO:GO:0005524GO:GO:0006869GO:GO:0016021GO:GO:0042626
GO:GO:0043231GO:GO:0055085Gramene:AT3G47790.1hmmpanther:PTHR19229
hmmpanther:PTHR19229:SF127HOGENOM:HOG000029960InParanoid:Q8LPK0InterPro:IPR003439
InterPro:IPR003593InterPro:IPR017871InterPro:IPR026082InterPro:IPR027417
KEGG:ath:AT3G47790OMA:WIIAMELPANTHER:PTHR19229PaxDb:Q8LPK0
Pfam:PF00005Pfam:PF12698Pfam:Q8LPK0Pfscan:PS50893
PIR:T07718PRIDE:Q8LPK0PRO:PR:Q8LPK0PROSITE:PS00211
PROSITE:PS50893ProteinModelPortal:Q8LPK0Proteomes:UP000006548RefSeq:NP_190363.3
scanprosite:PS00211SMART:SM00382SMR:Q8LPK0STRING:3702.AT3G47790.1
SUPFAM:SSF52540TAIR:AT3G47790tair10-symbols:ATATH7tair10-symbols:ATH7
TMHMM:TMhelixUniGene:At.35771UniProt:Q8LPK0
Coordinates (TAIR10) chr3:+:17629584..17633711
Molecular Weight (calculated) 101342.00 Da
IEP (calculated) 8.58
GRAVY (calculated) 0.04
Length 901 amino acids
Sequence (TAIR10)
(BLAST)
001: MADSSPASFL TQADALLRKN LVFQKRNIWS NIRLITIPFF LCLLLLVIQM LFDTQFNDVH GQCGCNEKTC GLRYSTSEQA AFCAIPNPPQ WTPLLQIPAP
101: EYRAAIPYPS HTSPATFLFT GNNQSLGNIL MGNMYSNSSG FDGDLAYYVL GSSSFPAYTN HMDSAFISDL PIYNIQHECS PNSSFSILIH QSPLAFPKEV
201: NCVQGLNLWR NSSSDVNNEL FKGYRKGNPD KKINEFAGAF DFQNTNGNNL NVSVWYNSTY KNDTVVRPMA LIRVPRLVNL ASNAYLEFLK GSETKILFEY
301: VKEMPKPETK LSLDIASLIG PLFFTWVILL LFPVILTTLV YEKQQRLRIM MKMHGLGDVP YWIVSYTYFL LISILYMLCF AIFGSLIGLN FFRLNDYSIQ
401: LVFFFICINL QISVAFLASA MFSDVKTATV IAYIYVFGTG LLGIFLFQFF LEDPLFPRGW IIAMELYPGF SLYRGLYELS QSAFAGDYRG IDGMKWRDFG
501: NGMKEVTCIM LIEWLLLLGL AYYIDQIIYS RKHPLFFLLQ STSKKKQHFS DNKISKVVVE MEKPDVCRER EKVEQCLLKS TRDSAVLCNN LKKVYSGKDG
601: NPQKLAVRGL SLALPQGECF GMLGPNGAGK TSFINMMTGI IKPSSGTAFV QGLDILTDMD RIYTTIGVCP QHDLLWEKLS GREHLLFYGR LKNLKGSVLT
701: QAVEESLRSV NLFHGGIGDK QVSKYSGGMK RRLSVAISLI GSPKVVYMDE PSTGLDPASR KSLWDVVKRA KRKGAIILTT HSMEEAEILC DRIGIFVDGS
801: LQCIGNPKEL KSRYGGSYVL TVTTSEEHEK EVEQLVHNIS TNAKKIYRTA GTQKFELPKQ EVKIGEVFKA LEKAKTMFPV VAWGLADTTL EDVFIKVAQT
901: S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)