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AT4G15396.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.995
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 702, subfamily A, polypeptide 6
Curator
Summary (TAIR10)
a member of the cytochrome P450 family. molecular function unknown.
Computational
Description (TAIR10)
cytochrome P450, family 702, subfamily A, polypeptide 6 (CYP702A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 702, subfamily A, polypeptide 5 (TAIR:AT4G15393.2); Has 23362 Blast hits to 23314 proteins in 1367 species: Archae - 48; Bacteria - 2759; Metazoa - 9973; Fungi - 3685; Plants - 6080; Viruses - 3; Other Eukaryotes - 814 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2124eggNOG:KOG0157EMBL:CP002687EnsemblPlants:AT4G15396
EnsemblPlants:AT4G15396.1entrez:827207Gene3D:1.10.630.10GeneID:827207
GO:GO:0004497GO:GO:0005506GO:GO:0005783GO:GO:0007275
GO:GO:0010268GO:GO:0016020GO:GO:0016125GO:GO:0016132
GO:GO:0016705GO:GO:0020037Gramene:AT4G15396.1hmmpanther:PTHR24286
hmmpanther:PTHR24286:SF37InParanoid:F4JK32InterPro:IPR001128InterPro:IPR002403
InterPro:IPR017972KEGG:ath:AT4G15396ncoils:CoilOMA:AWNIPGT
PaxDb:F4JK32Pfam:PF00067PRIDE:F4JK32PRINTS:PR00385
PRINTS:PR00465PROSITE:PS00086ProteinModelPortal:F4JK32Proteomes:UP000006548
Reactome:R-ATH-211916Reactome:R-ATH-5365859RefSeq:NP_680696.2scanprosite:PS00086
SMR:F4JK32STRING:3702.AT4G15396.1SUPFAM:SSF48264TAIR:AT4G15396
tair10-symbols:CYP702A6UniGene:At.21396UniProt:F4JK32
Coordinates (TAIR10) chr4:+:8807574..8810419
Molecular Weight (calculated) 54475.70 Da
IEP (calculated) 9.78
GRAVY (calculated) -0.15
Length 475 amino acids
Sequence (TAIR10)
(BLAST)
001: MVDLYEFWAV IVSLIVVKLC HSIYQWRNPK SNGELPPGSM GYPIIGETFE FMKPHDAIQL PTFVKEKVLR HGPVFRTSLF GGKVIISTDI GLNMEIAKTN
101: HIPGMPKSLA RLFGANNLFV NKDTHKHARS LTNQFLGSQA LKLRMLQDID FLVRTHLKEG ARKGSLDIKE TTSKIIIECL AKKVMGEMEP DAAKELTLCW
201: TFFPREWFGF AWNIPGTGVY RMVKARNRMM KVLKETVLKK RASGEELGDF FKTIFGDTER GVKTISLESA TEYIFTLFLL ANETTPAVLA ATIKLISDHP
301: KVMQELQREH EGIVRDKIEK NEKADLTWED YKSMTFTQMV INESLRITST VPTVLRIIDH EFQFGEYTIP AGWIFMGYPY VHFNAEKYDD PLAFNPWRWK
401: GKDLSAIVSR TYIPFGSGSR LCVGAEFVKL KMAIFIHHLS RYRWSMKTET TLLRRFVLIL PRGSDVQILE DTKAK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)